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The map label for this gene is 117919394

Identifier: 117919394

GI number: 117919394

Start: 1106168

End: 1106392

Strand: Direct

Name: 117919394

Synonym: Shewana3_0945

Alternate gene names: NA

Gene position: 1106168-1106392 (Clockwise)

Preceding gene: 117919393

Following gene: 117919395

Centisome position: 22.25

GC content: 44.89

Gene sequence:

>225_bases
ATGAGCACTTTTATCGCGGCATTTGTGATTTTATTACTGTTCTTTTTGCTTATGTCGATAGGTTATCTCATCAAGCGCAA
AGCCGTTGAAGGAAGCTGTGGCGGTTTAGGTGTATTAGGGATTGAAAAAGCCTGCGATTGTGATGATCCCTGCGACAAGC
GTAAGCGTCGTATGGCCGCAGAAGAAGCGCGCCGTGAGAAGTTAACGAAAGACAGGATCATTTAA

Upstream 100 bases:

>100_bases
AAGAACACTTGGCGATAATGCTAATAGAAAAGCAAGGCGAAGGATTTAAAGTCTACTACAGTGACGCCTTCAAGCCTTTC
CTTAAGTAGTTGGAGTTAAC

Downstream 100 bases:

>100_bases
TTATCCGCTTCAACTGAAATAGCCTCCTCTGGAGGCTATTTTTTTGCCTCGATTTTAGCATTGGCAAAATTAATCCTTGA
TATATGAGGAGGATAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MSTFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAAEEARREKLTKDRII

Sequences:

>Translated_74_residues
MSTFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAAEEARREKLTKDRII
>Mature_73_residues
STFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAAEEARREKLTKDRII

Specific function: Unknown

COG id: COG2991

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007495 [H]

Pfam domain/function: PF04400 DUF539 [H]

EC number: NA

Molecular weight: Translated: 8296; Mature: 8165

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EEARREKLTKDRII
HHHHHHHHHHHCCC
>Mature Secondary Structure 
STFIAAFVILLLFFLLMSIGYLIKRKAVEGSCGGLGVLGIEKACDCDDPCDKRKRRMAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
EEARREKLTKDRII
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]