Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is bolA [H]
Identifier: 117919383
GI number: 117919383
Start: 1094167
End: 1094487
Strand: Direct
Name: bolA [H]
Synonym: Shewana3_0934
Alternate gene names: 117919383
Gene position: 1094167-1094487 (Clockwise)
Preceding gene: 117919382
Following gene: 117919384
Centisome position: 22.01
GC content: 47.04
Gene sequence:
>321_bases ATGTCCAATACCCATGCGCAGGGCACAGTGGCACAGACCATTGATCAGAAGCTGACTGAAAGCTTCTCGCCAACTCATTT AGAAGTCCTTAACGAAAGTCACCGTCACCATGTTCCGCCTAATTCAGAGACTCACTTTAAAGTGGTTGTCGTCAGTGATG AATTTGATGGGCTTCGTTTGCTCGCCCGCCATCGTTTGGTTAATAACTGTTTAGCCAACGAGTTAGCGAACGGTGTGCAT GCACTTTCTATCCATACCTTCACTCAGAGTGAATGGGCTAAGGATGTTGAAGTGCCTAAAACGCCAAATTGCCGCGGTTA A
Upstream 100 bases:
>100_bases TGGCTCAGTTTAAAGCTGCAAAGCTGACGTTGGGATTTGATCTTTTGTACTTGAAGCAGTACTCTGCGGCCACTGGATTT TCCCATGTTGAGATTAGAAT
Downstream 100 bases:
>100_bases TTCGGCCCCTGAACTTTATAAAAGCCACGTTATCAACGTGGCTTTTTTGTTTTAGGTCAAATAGACGACAATATGCGGTT TCCCTGTTGAATTTTCTGTG
Product: transcriptional regulator BolA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSNTHAQGTVAQTIDQKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFDGLRLLARHRLVNNCLANELANGVH ALSIHTFTQSEWAKDVEVPKTPNCRG
Sequences:
>Translated_106_residues MSNTHAQGTVAQTIDQKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFDGLRLLARHRLVNNCLANELANGVH ALSIHTFTQSEWAKDVEVPKTPNCRG >Mature_105_residues SNTHAQGTVAQTIDQKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFDGLRLLARHRLVNNCLANELANGVHA LSIHTFTQSEWAKDVEVPKTPNCRG
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=105, Percent_Identity=47.6190476190476, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI87081740, Length=99, Percent_Identity=50.5050505050505, Blast_Score=104, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17541430, Length=104, Percent_Identity=50.9615384615385, Blast_Score=106, Evalue=3e-24, Organism=Drosophila melanogaster, GI221459039, Length=101, Percent_Identity=41.5841584158416, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 11843; Mature: 11712
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTHAQGTVAQTIDQKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFDGLRL CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHH LARHRLVNNCLANELANGVHALSIHTFTQSEWAKDVEVPKTPNCRG HHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure SNTHAQGTVAQTIDQKLTESFSPTHLEVLNESHRHHVPPNSETHFKVVVVSDEFDGLRL CCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHH LARHRLVNNCLANELANGVHALSIHTFTQSEWAKDVEVPKTPNCRG HHHHHHHHHHHHHHHHCCEEEEEEEECCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]