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The map label for this gene is 117919373

Identifier: 117919373

GI number: 117919373

Start: 1079666

End: 1080556

Strand: Reverse

Name: 117919373

Synonym: Shewana3_0924

Alternate gene names: NA

Gene position: 1080556-1079666 (Counterclockwise)

Preceding gene: 117919375

Following gene: 117919372

Centisome position: 21.73

GC content: 49.72

Gene sequence:

>891_bases
ATGCTGTATTTATTTCCCCTGCTCGCCGTCGTGATTTGGGCGGGCAACGCCATTGTTAACAAACTCTCCTTTGGGATCAT
CGCCCCCGAAGCGATAGCCTTTTATCGCTGGTTTTTTGCGATGCTAGTATTAACACCTTTTATGCTAAAACCCGTCTGGC
GTAAGCGTAAAACGATTGCACCATTACTGCCCAAACTCGCCACCTTGGCCGCCTTAGGCATGGTATTAAACCAAAGCCTA
GCTTATTTTGCGGCGGCAACCACAACTGCGACCAATATGGCCCTAATCAACTCGCTGGTGCCTATGGTGAGCTTGTTCTT
GGCCGTACCACTACTCAAACAAAAGCTGACGCCTCTTGTCTTTGGTGGCACTGTGATTTCGCTCTTGGGCTTAGTGTTCA
TGTTAAGCCACGGCGATATGGCCAATCTTGCCATCGGCGTGACCCAAGGGGATTTACTGTTACTCATCAGCGCCTTTGTA
TACGCACTTTATGGGGTATTGCTTAAACGCTGGCAATTGCCGATATCGACGTGGGAGTCAGTGTATATTCAAGGGCTTAT
CGCGGTGTTGATGTTAATCCCGCTGCTGTTTAGCGCGCCAAGTACAGCCATTAGCAGCCAAGCCGCGCCGTTAATACTCT
ATGCCGCTCTGGGGGCCTCACTCATCGCACCTTGGGCCTGGATTAATGGCATCAGCAAGTTAGGGGCCGAGCGCACCAGT
ATTTTCTTCAACTTGATGCCGATCCTCGCGGCAATCTTAGCGGCGATTATTCTGAATGAAACCTTAGCCGTTTATCACTA
TATAGGTGGTGCTATGGTCATCTTTGGGGTGATGTTAGTACAGGTAAAACCTAAACCGAAAACACCAGCGCCTATCGCCT
GCACCGAATAA

Upstream 100 bases:

>100_bases
TATTTATATCATAAAAGACCAGAGATAATAGCAGCAGCCTAAAACATCGGGTTTAAGCCCCTTCGCCTAACCCCGTCTCC
ACACCAATTAAGACTGACCT

Downstream 100 bases:

>100_bases
ATCGCTTAACTCAACGCCCCAAAACCTTGGGGCGTTTTTTTATCATCGCTTCTAATACAGACTTTTCGCAGGCTGCTGCA
AACAACCAAATAGCGACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MLYLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLVLTPFMLKPVWRKRKTIAPLLPKLATLAALGMVLNQSL
AYFAAATTTATNMALINSLVPMVSLFLAVPLLKQKLTPLVFGGTVISLLGLVFMLSHGDMANLAIGVTQGDLLLLISAFV
YALYGVLLKRWQLPISTWESVYIQGLIAVLMLIPLLFSAPSTAISSQAAPLILYAALGASLIAPWAWINGISKLGAERTS
IFFNLMPILAAILAAIILNETLAVYHYIGGAMVIFGVMLVQVKPKPKTPAPIACTE

Sequences:

>Translated_296_residues
MLYLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLVLTPFMLKPVWRKRKTIAPLLPKLATLAALGMVLNQSL
AYFAAATTTATNMALINSLVPMVSLFLAVPLLKQKLTPLVFGGTVISLLGLVFMLSHGDMANLAIGVTQGDLLLLISAFV
YALYGVLLKRWQLPISTWESVYIQGLIAVLMLIPLLFSAPSTAISSQAAPLILYAALGASLIAPWAWINGISKLGAERTS
IFFNLMPILAAILAAIILNETLAVYHYIGGAMVIFGVMLVQVKPKPKTPAPIACTE
>Mature_296_residues
MLYLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLVLTPFMLKPVWRKRKTIAPLLPKLATLAALGMVLNQSL
AYFAAATTTATNMALINSLVPMVSLFLAVPLLKQKLTPLVFGGTVISLLGLVFMLSHGDMANLAIGVTQGDLLLLISAFV
YALYGVLLKRWQLPISTWESVYIQGLIAVLMLIPLLFSAPSTAISSQAAPLILYAALGASLIAPWAWINGISKLGAERTS
IFFNLMPILAAILAAIILNETLAVYHYIGGAMVIFGVMLVQVKPKPKTPAPIACTE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31929; Mature: 31929

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLVLTPFMLKPVWRKRKTIA
CHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLPKLATLAALGMVLNQSLAYFAAATTTATNMALINSLVPMVSLFLAVPLLKQKLTPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FGGTVISLLGLVFMLSHGDMANLAIGVTQGDLLLLISAFVYALYGVLLKRWQLPISTWES
HHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VYIQGLIAVLMLIPLLFSAPSTAISSQAAPLILYAALGASLIAPWAWINGISKLGAERTS
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IFFNLMPILAAILAAIILNETLAVYHYIGGAMVIFGVMLVQVKPKPKTPAPIACTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLYLFPLLAVVIWAGNAIVNKLSFGIIAPEAIAFYRWFFAMLVLTPFMLKPVWRKRKTIA
CHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLPKLATLAALGMVLNQSLAYFAAATTTATNMALINSLVPMVSLFLAVPLLKQKLTPLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FGGTVISLLGLVFMLSHGDMANLAIGVTQGDLLLLISAFVYALYGVLLKRWQLPISTWES
HHHHHHHHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VYIQGLIAVLMLIPLLFSAPSTAISSQAAPLILYAALGASLIAPWAWINGISKLGAERTS
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
IFFNLMPILAAILAAIILNETLAVYHYIGGAMVIFGVMLVQVKPKPKTPAPIACTE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]