Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is icc [H]
Identifier: 117919180
GI number: 117919180
Start: 844152
End: 844991
Strand: Direct
Name: icc [H]
Synonym: Shewana3_0728
Alternate gene names: 117919180
Gene position: 844152-844991 (Clockwise)
Preceding gene: 117919179
Following gene: 117919181
Centisome position: 16.98
GC content: 50.71
Gene sequence:
>840_bases GTGCTGAAAGAGGCTGTCTCTTACTCAATAGCTGAAGAAGAAAGTGTGCGCATAGTGCAAGTCACTGATCCGCACCTTTT TGCCGATCCTGAGGCGCAGTTATTAGGGGTCAACACCAGTAAAAGTTTTGCTGCTGTACTTAATACGATCCGCGCTGTCG ACTATCCAGCGCATCTGATGTTAGCCACGGGCGATCTAAGCCAAGATTATTCCCCCGAATCCTATCGTCAATTTGTGGCC GCAGTGGCGCCACTTAACTTACCTTGCCATTATCTTCCAGGTAATCATGACGATCCGCGGATCATGTATCTGCATATGCA GGGCGAGCGGATTTTTGGTCAGCAGCGTATCCTTGCGGGTAAATGGCAAATCTTGATGCTGGACTCCACCGTGCGGGGAA AGCCCGGCGGCAATATGGCCGAGAGTCAATTCGAACTCATTGAACAGGCCATAGCCGCGCATCCAGACCGCCACACCTTA CTGGTGATGCACCACAACCCTATCTTGGTGAATTGCGCTTGGTTAGACCAACATTGCATGGATAACGGCACTGAGTTTCT CAGACGTGTCGCCCAATACCCACAGGTTAAGGGGTTACTCTGGGGCCATGTGCATCAACAGTTGGATACCGACTATGACG GTCCCCATGGCCCGCTACAATTAATGGCGACGCCTTCTACTTGTATTCAGTTTAAACCGCAATCGCCTTATTTTGCCCTC GATGGACTGCAACCCGGTTATCGTTTGCTGGAGCTGAAGGCCGATGGTAGCATCTGCACTAATGTGTATCGCGTGCCGGG AAATCTGTTTTCCCCCGATAAAGATTCCAGCGGTTATTAA
Upstream 100 bases:
>100_bases TAGCGATGAAAAGTACCAGGTTAATGCATTCCTGGGGGAGTTATTGAAGATTGGCTGCCAACAACGTTTGGTGTGTCAAT CTTAGAATTGGGTATTCAAT
Downstream 100 bases:
>100_bases CGCGAGTGACCGCAGCTTGAGGAACTATGCTGCTCTATATTCACGGATTCAACAGTTCACCTTTCTCCGATAAAGCGGTG ATGACGGCGCAATATATGGC
Product: calcineurin phosphoesterase C-terminal domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLKEAVSYSIAEEESVRIVQVTDPHLFADPEAQLLGVNTSKSFAAVLNTIRAVDYPAHLMLATGDLSQDYSPESYRQFVA AVAPLNLPCHYLPGNHDDPRIMYLHMQGERIFGQQRILAGKWQILMLDSTVRGKPGGNMAESQFELIEQAIAAHPDRHTL LVMHHNPILVNCAWLDQHCMDNGTEFLRRVAQYPQVKGLLWGHVHQQLDTDYDGPHGPLQLMATPSTCIQFKPQSPYFAL DGLQPGYRLLELKADGSICTNVYRVPGNLFSPDKDSSGY
Sequences:
>Translated_279_residues MLKEAVSYSIAEEESVRIVQVTDPHLFADPEAQLLGVNTSKSFAAVLNTIRAVDYPAHLMLATGDLSQDYSPESYRQFVA AVAPLNLPCHYLPGNHDDPRIMYLHMQGERIFGQQRILAGKWQILMLDSTVRGKPGGNMAESQFELIEQAIAAHPDRHTL LVMHHNPILVNCAWLDQHCMDNGTEFLRRVAQYPQVKGLLWGHVHQQLDTDYDGPHGPLQLMATPSTCIQFKPQSPYFAL DGLQPGYRLLELKADGSICTNVYRVPGNLFSPDKDSSGY >Mature_279_residues MLKEAVSYSIAEEESVRIVQVTDPHLFADPEAQLLGVNTSKSFAAVLNTIRAVDYPAHLMLATGDLSQDYSPESYRQFVA AVAPLNLPCHYLPGNHDDPRIMYLHMQGERIFGQQRILAGKWQILMLDSTVRGKPGGNMAESQFELIEQAIAAHPDRHTL LVMHHNPILVNCAWLDQHCMDNGTEFLRRVAQYPQVKGLLWGHVHQQLDTDYDGPHGPLQLMATPSTCIQFKPQSPYFAL DGLQPGYRLLELKADGSICTNVYRVPGNLFSPDKDSSGY
Specific function: Affects the expression of the lacZ gene [H]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=279, Percent_Identity=46.2365591397849, Blast_Score=243, Evalue=9e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 31195; Mature: 31195
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKEAVSYSIAEEESVRIVQVTDPHLFADPEAQLLGVNTSKSFAAVLNTIRAVDYPAHLM CCCHHHHHHCCCCCCEEEEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCEEE LATGDLSQDYSPESYRQFVAAVAPLNLPCHYLPGNHDDPRIMYLHMQGERIFGQQRILAG EEECCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEC KWQILMLDSTVRGKPGGNMAESQFELIEQAIAAHPDRHTLLVMHHNPILVNCAWLDQHCM CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHHH DNGTEFLRRVAQYPQVKGLLWGHVHQQLDTDYDGPHGPLQLMATPSTCIQFKPQSPYFAL CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCCEEE DGLQPGYRLLELKADGSICTNVYRVPGNLFSPDKDSSGY CCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MLKEAVSYSIAEEESVRIVQVTDPHLFADPEAQLLGVNTSKSFAAVLNTIRAVDYPAHLM CCCHHHHHHCCCCCCEEEEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCEEE LATGDLSQDYSPESYRQFVAAVAPLNLPCHYLPGNHDDPRIMYLHMQGERIFGQQRILAG EEECCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCCEEEEC KWQILMLDSTVRGKPGGNMAESQFELIEQAIAAHPDRHTLLVMHHNPILVNCAWLDQHCM CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEEHHHHHH DNGTEFLRRVAQYPQVKGLLWGHVHQQLDTDYDGPHGPLQLMATPSTCIQFKPQSPYFAL CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCCCEEE DGLQPGYRLLELKADGSICTNVYRVPGNLFSPDKDSSGY CCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]