Click here to switch to the map view.

The map label for this gene is yqiB [H]

Identifier: 117919179

GI number: 117919179

Start: 843684

End: 844136

Strand: Direct

Name: yqiB [H]

Synonym: Shewana3_0727

Alternate gene names: 117919179

Gene position: 843684-844136 (Clockwise)

Preceding gene: 117919178

Following gene: 117919180

Centisome position: 16.97

GC content: 42.16

Gene sequence:

>453_bases
TTGGATAAAGGTTTGGCTACTTCAACATCGCACCGAAAACCGCGCTACCAACCTAACGTGAGCGACTTTTTAGCGCTATG
CGGGCGTAACTACGGCTATATGCAGAAGTGGTTACCGCTCGATATTGAAGTGGGCCAGTCTTGGCAACTCGAAGGTGAAG
CGGGTGTATTAGTAATCCGTATTTTAGAAAATACCAAATACACTCAATTAGTTGAGATCTTACGCCCGGTTAAAATCATG
GAGTTTATTAATACTCCCAAGGTGTTAGTGAGAATTTATCATGATGCTAAATTAGCAGAAGTGTTAACTGGTCAACAGAT
TTACCAATTGCGCCCAGTGTATGATTATCCCAATTTACGCATGTATCATAGCGATGAAAAGTACCAGGTTAATGCATTCC
TGGGGGAGTTATTGAAGATTGGCTGCCAACAACGTTTGGTGTGTCAATCTTAG

Upstream 100 bases:

>100_bases
GAGGATGCCTATAATCAGGTCGTCAACGGGGCAATAGACAATGCGTCGACCGTAATTGGATTGCAGTGGTTGCAATTAAA
CTATCAGCAACTGGTTAAAG

Downstream 100 bases:

>100_bases
AATTGGGTATTCAATGTGCTGAAAGAGGCTGTCTCTTACTCAATAGCTGAAGAAGAAAGTGTGCGCATAGTGCAAGTCAC
TGATCCGCACCTTTTTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MDKGLATSTSHRKPRYQPNVSDFLALCGRNYGYMQKWLPLDIEVGQSWQLEGEAGVLVIRILENTKYTQLVEILRPVKIM
EFINTPKVLVRIYHDAKLAEVLTGQQIYQLRPVYDYPNLRMYHSDEKYQVNAFLGELLKIGCQQRLVCQS

Sequences:

>Translated_150_residues
MDKGLATSTSHRKPRYQPNVSDFLALCGRNYGYMQKWLPLDIEVGQSWQLEGEAGVLVIRILENTKYTQLVEILRPVKIM
EFINTPKVLVRIYHDAKLAEVLTGQQIYQLRPVYDYPNLRMYHSDEKYQVNAFLGELLKIGCQQRLVCQS
>Mature_150_residues
MDKGLATSTSHRKPRYQPNVSDFLALCGRNYGYMQKWLPLDIEVGQSWQLEGEAGVLVIRILENTKYTQLVEILRPVKIM
EFINTPKVLVRIYHDAKLAEVLTGQQIYQLRPVYDYPNLRMYHSDEKYQVNAFLGELLKIGCQQRLVCQS

Specific function: Unknown

COG id: COG3151

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789411, Length=125, Percent_Identity=34.4, Blast_Score=97, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009659 [H]

Pfam domain/function: PF06853 DUF1249 [H]

EC number: NA

Molecular weight: Translated: 17451; Mature: 17451

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKGLATSTSHRKPRYQPNVSDFLALCGRNYGYMQKWLPLDIEVGQSWQLEGEAGVLVIR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCEEECCCCEEECCCCCEEEEE
ILENTKYTQLVEILRPVKIMEFINTPKVLVRIYHDAKLAEVLTGQQIYQLRPVYDYPNLR
EECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCHHEEECCCCCCCCCE
MYHSDEKYQVNAFLGELLKIGCQQRLVCQS
EEECCCCEEHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDKGLATSTSHRKPRYQPNVSDFLALCGRNYGYMQKWLPLDIEVGQSWQLEGEAGVLVIR
CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCCEEECCCCEEECCCCCEEEEE
ILENTKYTQLVEILRPVKIMEFINTPKVLVRIYHDAKLAEVLTGQQIYQLRPVYDYPNLR
EECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCHHEEECCCCCCCCCE
MYHSDEKYQVNAFLGELLKIGCQQRLVCQS
EEECCCCEEHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]