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The map label for this gene is motX [H]

Identifier: 117919148

GI number: 117919148

Start: 811776

End: 812432

Strand: Direct

Name: motX [H]

Synonym: Shewana3_0696

Alternate gene names: 117919148

Gene position: 811776-812432 (Clockwise)

Preceding gene: 117919147

Following gene: 117919149

Centisome position: 16.33

GC content: 47.49

Gene sequence:

>657_bases
ATGCAAGTATTCACCCTATTGTCATTGAGAGTCGTTATGCTACGTACTGCATTAGTTGCGCTGCTGCCCTTAGTATCTTC
AATGTGCTTTGCTGAAACACAGGCGGTGGATATTTATTCTCAAGATCAATTACTTGAAATGATCCGCGGCGAAAAATATC
TGGCAAGAGTTAAGCAAGATGACTGTCAGTTAGTGCAAGACATCGAAGCGCGTGCAGAAGTCTTAAAGCAGCCCCTGTAT
CAGTTTTTGTGGGGGGAAATGCTCAACCATGGCACCTGCGTAAAAGCCAATGCAGTCAAAGGGATGGGATTATTGCAAGA
GGCGGCCGAGCAGGGTAGCCCCGAGGCCATGGTGAAACTTGCCGAATATTATCAAAATGGTAAGTTTGTTATTCGTAATA
AAGACCGTGCGGTCAATTATTTATTGCCAGCGGCGGCGAGCGGCAGTTTAGCCGCGCGGATGATGCTGGTTCGTTTATAC
GGTGAAGGTTATGGTAGTCCAAGGGACTATGAAATGGCCTATAACTGGTTATACAACAATGTATTTACCGATGAGGCGAC
CAAGAAAAAAGCCTTGTCATTACTGCAGGTGTTAGCCGCTAAAATGCCCGCCAGTGCAGTGGCGCGGGCCCAGCAAGAGC
ACTTGCGAACCCGTTGA

Upstream 100 bases:

>100_bases
AGGCCGTGTTCCACGGCCTTTTCTTCCTTTGTTGTGCCTTCCTGTTTGTTTTCTGTGGTTAGAAATTCGGCTTGAGCTCA
AGAAATAGGTTATACTGCCG

Downstream 100 bases:

>100_bases
GTTGTCTCTACAGATTGAGACAGAAATATTGGATATTGAATGATCAAAGACCCTCATTTCGAGCGTGAACAGGATAAGTA
CGAAAACCCTATCCCAAGTC

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLEMIRGEKYLARVKQDDCQLVQDIEARAEVLKQPLY
QFLWGEMLNHGTCVKANAVKGMGLLQEAAEQGSPEAMVKLAEYYQNGKFVIRNKDRAVNYLLPAAASGSLAARMMLVRLY
GEGYGSPRDYEMAYNWLYNNVFTDEATKKKALSLLQVLAAKMPASAVARAQQEHLRTR

Sequences:

>Translated_218_residues
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLEMIRGEKYLARVKQDDCQLVQDIEARAEVLKQPLY
QFLWGEMLNHGTCVKANAVKGMGLLQEAAEQGSPEAMVKLAEYYQNGKFVIRNKDRAVNYLLPAAASGSLAARMMLVRLY
GEGYGSPRDYEMAYNWLYNNVFTDEATKKKALSLLQVLAAKMPASAVARAQQEHLRTR
>Mature_218_residues
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLEMIRGEKYLARVKQDDCQLVQDIEARAEVLKQPLY
QFLWGEMLNHGTCVKANAVKGMGLLQEAAEQGSPEAMVKLAEYYQNGKFVIRNKDRAVNYLLPAAASGSLAARMMLVRLY
GEGYGSPRDYEMAYNWLYNNVFTDEATKKKALSLLQVLAAKMPASAVARAQQEHLRTR

Specific function: The power to drive the polar flagellar rotary motor of V.parahaemolyticus is derived from the transmembrane potential of sodium ions. Force is generated by the motor on coupling of the movement of ions across the membrane to rotation of the flagellum. Mot

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 Sel1-like repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 24491; Mature: 24491

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLEMIRGEKYLARVKQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DCQLVQDIEARAEVLKQPLYQFLWGEMLNHGTCVKANAVKGMGLLQEAAEQGSPEAMVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHH
AEYYQNGKFVIRNKDRAVNYLLPAAASGSLAARMMLVRLYGEGYGSPRDYEMAYNWLYNN
HHHHHCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VFTDEATKKKALSLLQVLAAKMPASAVARAQQEHLRTR
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQVFTLLSLRVVMLRTALVALLPLVSSMCFAETQAVDIYSQDQLLEMIRGEKYLARVKQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
DCQLVQDIEARAEVLKQPLYQFLWGEMLNHGTCVKANAVKGMGLLQEAAEQGSPEAMVKL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHH
AEYYQNGKFVIRNKDRAVNYLLPAAASGSLAARMMLVRLYGEGYGSPRDYEMAYNWLYNN
HHHHHCCCEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
VFTDEATKKKALSLLQVLAAKMPASAVARAQQEHLRTR
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7928960; 12620739 [H]