Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919138
Identifier: 117919138
GI number: 117919138
Start: 802841
End: 803701
Strand: Direct
Name: 117919138
Synonym: Shewana3_0686
Alternate gene names: NA
Gene position: 802841-803701 (Clockwise)
Preceding gene: 117919136
Following gene: 117919139
Centisome position: 16.15
GC content: 45.41
Gene sequence:
>861_bases ATGATCTCAACATCGTTTTACACGGAAGATCATTATTTACTCCGTGGCCAGCTGTTTTGCACAGAAAAGGCTATGCAAGG TCGAGTCATTGTTGCGGGGGCGACTGGTGTGCCGCAGGCGTTTTATCGCCGCTTTGCTCAATTTGCAAGTGAACAAGGAT TTGAAACATTAACCTTTGATTACCGTGGAATAGGACAATCCAAACCTGAAACGCTAGAGGGTTTTGAAATGAACCTTCTC GACTGGGGTAAACAAGATCTCGCTGCCGCAGTCCAGTTTATGAGTAAAGATGACGCCCCACTCTTTATTGTTGGCCATTC CTATGGTGGTCATGCATTTGGTTTACTGCCAAATCATCAAAAAGTCACAGGTGCTTATATATTTGGTACAGGCGCGGGGT GGCATGGTTATATGCCCTTGTTTGAACAAGCTAAAGTACTAACGATGTGGAATATCGTTCTGCCGCTCCTAACGTGGTGG AAGGGATACTGCGCTTGGAACCTATTGGGAATGGGCGAAGATCTGCCAAAAAACGTGTTTAAGCAATGGCGGCACTGGTG TCGTTTTCGTCATTACTTTTTTGATGATCCCACCATGGATGGAATTGAAAAACTCTTCCAATCGGTACAGACCCCTATGG TTGCAGCCAATGCGCTAGATGATCTTTGGGCTATGCCTGAATCGCGAGATGCGTTTATTCAGCACTACAGTAATGCGCCA TTAACCCGTCTTGATCTCTCTCCAAAGATCTTAGGCGGCAAGATTGGGCATATGGGGTACTTCCGTAAAAACGCGATTCC TCTATGGCAAGCCAGTTTAGATTGGTTCACGGCGATTAATAAGGAAAATAAAGCAATATGA
Upstream 100 bases:
>100_bases TCATTAGAGATTGTGCCCATGAAAATCCCACTTGTTATAACAGTTGTTATAGGCTAGCATCAAAAACACATTAAGACACT CGTTATAATTAGTGAGCGCT
Downstream 100 bases:
>100_bases GCACATCGAGACCATGGTTAATTCCCCTCAAATGGATACTGATTGCTACGTTTTTGAGCAGTGTTCTGCATTACGTCGAT AACATACTTTTTTTTGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Family; Dehydrogenase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MISTSFYTEDHYLLRGQLFCTEKAMQGRVIVAGATGVPQAFYRRFAQFASEQGFETLTFDYRGIGQSKPETLEGFEMNLL DWGKQDLAAAVQFMSKDDAPLFIVGHSYGGHAFGLLPNHQKVTGAYIFGTGAGWHGYMPLFEQAKVLTMWNIVLPLLTWW KGYCAWNLLGMGEDLPKNVFKQWRHWCRFRHYFFDDPTMDGIEKLFQSVQTPMVAANALDDLWAMPESRDAFIQHYSNAP LTRLDLSPKILGGKIGHMGYFRKNAIPLWQASLDWFTAINKENKAI
Sequences:
>Translated_286_residues MISTSFYTEDHYLLRGQLFCTEKAMQGRVIVAGATGVPQAFYRRFAQFASEQGFETLTFDYRGIGQSKPETLEGFEMNLL DWGKQDLAAAVQFMSKDDAPLFIVGHSYGGHAFGLLPNHQKVTGAYIFGTGAGWHGYMPLFEQAKVLTMWNIVLPLLTWW KGYCAWNLLGMGEDLPKNVFKQWRHWCRFRHYFFDDPTMDGIEKLFQSVQTPMVAANALDDLWAMPESRDAFIQHYSNAP LTRLDLSPKILGGKIGHMGYFRKNAIPLWQASLDWFTAINKENKAI >Mature_286_residues MISTSFYTEDHYLLRGQLFCTEKAMQGRVIVAGATGVPQAFYRRFAQFASEQGFETLTFDYRGIGQSKPETLEGFEMNLL DWGKQDLAAAVQFMSKDDAPLFIVGHSYGGHAFGLLPNHQKVTGAYIFGTGAGWHGYMPLFEQAKVLTMWNIVLPLLTWW KGYCAWNLLGMGEDLPKNVFKQWRHWCRFRHYFFDDPTMDGIEKLFQSVQTPMVAANALDDLWAMPESRDAFIQHYSNAP LTRLDLSPKILGGKIGHMGYFRKNAIPLWQASLDWFTAINKENKAI
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32646; Mature: 32646
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISTSFYTEDHYLLRGQLFCTEKAMQGRVIVAGATGVPQAFYRRFAQFASEQGFETLTFD CCCCCEECCCCEEEEEEEEEEHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE YRGIGQSKPETLEGFEMNLLDWGKQDLAAAVQFMSKDDAPLFIVGHSYGGHAFGLLPNHQ ECCCCCCCCCCCCCCEECHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC KVTGAYIFGTGAGWHGYMPLFEQAKVLTMWNIVLPLLTWWKGYCAWNLLGMGEDLPKNVF EEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH KQWRHWCRFRHYFFDDPTMDGIEKLFQSVQTPMVAANALDDLWAMPESRDAFIQHYSNAP HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC LTRLDLSPKILGGKIGHMGYFRKNAIPLWQASLDWFTAINKENKAI EEEECCCCHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MISTSFYTEDHYLLRGQLFCTEKAMQGRVIVAGATGVPQAFYRRFAQFASEQGFETLTFD CCCCCEECCCCEEEEEEEEEEHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEE YRGIGQSKPETLEGFEMNLLDWGKQDLAAAVQFMSKDDAPLFIVGHSYGGHAFGLLPNHQ ECCCCCCCCCCCCCCEECHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCC KVTGAYIFGTGAGWHGYMPLFEQAKVLTMWNIVLPLLTWWKGYCAWNLLGMGEDLPKNVF EEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHH KQWRHWCRFRHYFFDDPTMDGIEKLFQSVQTPMVAANALDDLWAMPESRDAFIQHYSNAP HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCC LTRLDLSPKILGGKIGHMGYFRKNAIPLWQASLDWFTAINKENKAI EEEECCCCHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA