Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919139
Identifier: 117919139
GI number: 117919139
Start: 803698
End: 804102
Strand: Direct
Name: 117919139
Synonym: Shewana3_0687
Alternate gene names: NA
Gene position: 803698-804102 (Clockwise)
Preceding gene: 117919138
Following gene: 117919140
Centisome position: 16.16
GC content: 39.01
Gene sequence:
>405_bases ATGAGCACATCGAGACCATGGTTAATTCCCCTCAAATGGATACTGATTGCTACGTTTTTGAGCAGTGTTCTGCATTACGT CGATAACATACTTTTTTTTGCCCATTACCCTGAACCAAACTGGTTAAATCCTAAGCTTGTTGATCTCTTTTGGTTTGTTA TGACACCTCTGGCGCCGTTAGGATTCTACGTGATTAAAAAAGGGCATCATCATATAGGCGCCGCAATTCTTATCGTTTAC GGAGTATGCAACATACTTACGCTTGGGCATTACAACTACGCTCCGATAAATAGCATTGCGATGAAAATCCATTTGTTTAT CGCTTTAGAAGCAATAATGGGATGCATATTAATTGGTTACATCTTGCTGCTTTATAAAAATTCGCTTCGTATTGTTGCTC GTTAA
Upstream 100 bases:
>100_bases GCAAGATTGGGCATATGGGGTACTTCCGTAAAAACGCGATTCCTCTATGGCAAGCCAGTTTAGATTGGTTCACGGCGATT AATAAGGAAAATAAAGCAAT
Downstream 100 bases:
>100_bases TTCACTCTGCATTATTTATTACAAGGATAAAAATTGAATATCTCTCATCTCAGCGGATTGGAACATTTAAGCGCTATCAT CAACGGCGACATACCACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MSTSRPWLIPLKWILIATFLSSVLHYVDNILFFAHYPEPNWLNPKLVDLFWFVMTPLAPLGFYVIKKGHHHIGAAILIVY GVCNILTLGHYNYAPINSIAMKIHLFIALEAIMGCILIGYILLLYKNSLRIVAR
Sequences:
>Translated_134_residues MSTSRPWLIPLKWILIATFLSSVLHYVDNILFFAHYPEPNWLNPKLVDLFWFVMTPLAPLGFYVIKKGHHHIGAAILIVY GVCNILTLGHYNYAPINSIAMKIHLFIALEAIMGCILIGYILLLYKNSLRIVAR >Mature_133_residues STSRPWLIPLKWILIATFLSSVLHYVDNILFFAHYPEPNWLNPKLVDLFWFVMTPLAPLGFYVIKKGHHHIGAAILIVYG VCNILTLGHYNYAPINSIAMKIHLFIALEAIMGCILIGYILLLYKNSLRIVAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15335; Mature: 15204
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSRPWLIPLKWILIATFLSSVLHYVDNILFFAHYPEPNWLNPKLVDLFWFVMTPLAPL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHH GFYVIKKGHHHIGAAILIVYGVCNILTLGHYNYAPINSIAMKIHLFIALEAIMGCILIGY HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILLLYKNSLRIVAR HHHHHHCCEEEEEC >Mature Secondary Structure STSRPWLIPLKWILIATFLSSVLHYVDNILFFAHYPEPNWLNPKLVDLFWFVMTPLAPL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHH GFYVIKKGHHHIGAAILIVYGVCNILTLGHYNYAPINSIAMKIHLFIALEAIMGCILIGY HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ILLLYKNSLRIVAR HHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA