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The map label for this gene is ybeQ [C]

Identifier: 117919071

GI number: 117919071

Start: 723289

End: 724068

Strand: Direct

Name: ybeQ [C]

Synonym: Shewana3_0618

Alternate gene names: 117919071

Gene position: 723289-724068 (Clockwise)

Preceding gene: 117919066

Following gene: 117919073

Centisome position: 14.55

GC content: 53.08

Gene sequence:

>780_bases
GTGAAATACAGACAATGGGTTTTAGGCGCCGGATTCACTTTATCCCTAGGGATGAGTGCTGCCGCGCACGCATTTTCTAT
TCCACAGCCAGCCAATGAAGTTGCGGCAAGTAAATTTGTGCACATTCAAGTGCAGGCCGAGCAGGGCGATGCCGACGCAC
AATTTTTACTGGGGCTGATGTTTCTCTCTGGACGTTATGTACAGCAAGAAGTGCCGACCGGATTGCATTGGATGACCCTT
GCCGCCGAGCAGCAACACGAAAAGGCGCAGCAAACCTTAGCGGATCTCTCCTTTGAGGGGCAGCTAGTAAAGCGTGACTT
AGCCGTGGCCGAACGTTGGTATAAGGATATGGGCGAGCGTGGTAATCGCTGGGCGCAGTTCCGTTTAGGCTTTATTTATG
CCTCGGGTGGCGATGGCATTGCGCGTAACTGTGGTAAAGCCGTGGAGCAATTTACCCGCGTGGGGGATGATGTTGCCCTT
GGCAATGTGGCGTGGATTTTAGCGACTTGCCCCGAAGCCGAATATCGCGATGGTAATAAAGCGCTCGAATTATCCTTGCA
GCTGCTGAAAGTGAACGAGAACGATCCCACCAACCTCGATAACTTGGCGGCCGCCTATGCCGAAGTCGGTGATTTTGGCG
CCGCGGTATCGACCCAGCAAAAAGCGATAGCTGCCTTAAAGATGACGGCCGAAGCCACTAAGACTGACGAGTTTCAGCAG
CGCCTGCACAGCTATGAGCAAAAGCGCGCTTACCGTGAGACCTTGCGTTTACTCGATTAA

Upstream 100 bases:

>100_bases
CTATTTAATATAGGTTCGATTACGCCGATTTAGGCTCGACTTATGGGAATAATTCAGGCTAACTTGAGGGCGCGGTTGTT
TTTCGTAAAGAGGTTACCAG

Downstream 100 bases:

>100_bases
CCTCGTCTGTGGTTGCTTGTCTTGTTATCAGCCCGAGCCATGCTCGGGCTGATTGTTTTTTAAGGATTATTTTTACTGAT
TACTTCTAGTGCATCGTTTA

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Domain Protein Repeat-Containing Protein; Sel1 Repeat-Containing Protein; TPR Repeat Protein; Sel1 Repeat Family; Sodium-Type Flagellar Motor Component; Tetratricopeptide Repeat Family Protein; Sel1-Like Repeat-Containing Serine/Threonine Protein Kinase; Sel1-Like Repeat Protein; Tetratricopeptide TPR_2 Repeat Protein; Serine/Threonine Protein Kinase; TPR Repeat-Containing SEL1 Subfamily Protein; Sel1-Like Protein; Sporulation Domain-Containing Protein; TPR Repeat Protein SEL1 Subfamily

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKYRQWVLGAGFTLSLGMSAAAHAFSIPQPANEVAASKFVHIQVQAEQGDADAQFLLGLMFLSGRYVQQEVPTGLHWMTL
AAEQQHEKAQQTLADLSFEGQLVKRDLAVAERWYKDMGERGNRWAQFRLGFIYASGGDGIARNCGKAVEQFTRVGDDVAL
GNVAWILATCPEAEYRDGNKALELSLQLLKVNENDPTNLDNLAAAYAEVGDFGAAVSTQQKAIAALKMTAEATKTDEFQQ
RLHSYEQKRAYRETLRLLD

Sequences:

>Translated_259_residues
MKYRQWVLGAGFTLSLGMSAAAHAFSIPQPANEVAASKFVHIQVQAEQGDADAQFLLGLMFLSGRYVQQEVPTGLHWMTL
AAEQQHEKAQQTLADLSFEGQLVKRDLAVAERWYKDMGERGNRWAQFRLGFIYASGGDGIARNCGKAVEQFTRVGDDVAL
GNVAWILATCPEAEYRDGNKALELSLQLLKVNENDPTNLDNLAAAYAEVGDFGAAVSTQQKAIAALKMTAEATKTDEFQQ
RLHSYEQKRAYRETLRLLD
>Mature_259_residues
MKYRQWVLGAGFTLSLGMSAAAHAFSIPQPANEVAASKFVHIQVQAEQGDADAQFLLGLMFLSGRYVQQEVPTGLHWMTL
AAEQQHEKAQQTLADLSFEGQLVKRDLAVAERWYKDMGERGNRWAQFRLGFIYASGGDGIARNCGKAVEQFTRVGDDVAL
GNVAWILATCPEAEYRDGNKALELSLQLLKVNENDPTNLDNLAAAYAEVGDFGAAVSTQQKAIAALKMTAEATKTDEFQQ
RLHSYEQKRAYRETLRLLD

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081769, Length=170, Percent_Identity=30, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28677; Mature: 28677

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYRQWVLGAGFTLSLGMSAAAHAFSIPQPANEVAASKFVHIQVQAEQGDADAQFLLGLM
CCCHHEEECCCCCEECCCHHHHHHCCCCCCHHHHHHCEEEEEEEEECCCCCHHHHHHHHH
FLSGRYVQQEVPTGLHWMTLAAEQQHEKAQQTLADLSFEGQLVKRDLAVAERWYKDMGER
HHCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
GNRWAQFRLGFIYASGGDGIARNCGKAVEQFTRVGDDVALGNVAWILATCPEAEYRDGNK
CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCHHEEEEEECCCCCCCCCCH
ALELSLQLLKVNENDPTNLDNLAAAYAEVGDFGAAVSTQQKAIAALKMTAEATKTDEFQQ
HEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
RLHSYEQKRAYRETLRLLD
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYRQWVLGAGFTLSLGMSAAAHAFSIPQPANEVAASKFVHIQVQAEQGDADAQFLLGLM
CCCHHEEECCCCCEECCCHHHHHHCCCCCCHHHHHHCEEEEEEEEECCCCCHHHHHHHHH
FLSGRYVQQEVPTGLHWMTLAAEQQHEKAQQTLADLSFEGQLVKRDLAVAERWYKDMGER
HHCCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
GNRWAQFRLGFIYASGGDGIARNCGKAVEQFTRVGDDVALGNVAWILATCPEAEYRDGNK
CCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEECCHHEEEEEECCCCCCCCCCH
ALELSLQLLKVNENDPTNLDNLAAAYAEVGDFGAAVSTQQKAIAALKMTAEATKTDEFQQ
HEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHH
RLHSYEQKRAYRETLRLLD
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA