Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919066
Identifier: 117919066
GI number: 117919066
Start: 718878
End: 719681
Strand: Direct
Name: 117919066
Synonym: Shewana3_0613
Alternate gene names: NA
Gene position: 718878-719681 (Clockwise)
Preceding gene: 117919065
Following gene: 117919071
Centisome position: 14.46
GC content: 47.39
Gene sequence:
>804_bases ATGCACACAGATATCAATGCGTTATTTGCCGCTCTCTGGCAAGACTATATTCAAATGACCCCATCTGCGGCCAAGGTGCA CGAGCTACTCGGACACGGCAAGCCAATTATCAACGACCATATCGCCCTGCGTACTTTTAACATCGCTAAGGTGAATTTAG CCGTATTGGCCGAACACTTTACCTCTTTAGGTTATGTGGCTTGTGGTGATTATAAGTTTGAACAGAAAAAACTGGTGGCT AAGCATTTTGAGCACCCAGATGCGACTCAGCCAAAGGTGTTTATTTCTGAGTTATTGGTGGAAGAGTTTAGCCCATCATT GCAAAGCACTATCCAAGGTTTGATTGCTCAAGTGGATGAAGAGGCGACTAAAGCAGATAACTTTATCTATTCGGGTCGCC ATTGGTCACTGGATGCTAAGACCTATGAGACGCTGCTCGAAGAGAGCGAATATGCGGCTTGGGTAGCGGCCTTTGGCTAT CGTGCGAACCATTTCACTGTCTCTATCAATCACCTCGAGGGCTTCGAGACATTAGAGTCTGTGAATGATGCGCTTAAGCA AGCGGGCTTTGTGCTGAATAGTGCAGGTGGCGAGATCAAAGGTTCGCCAGAGGTGTTATTGGAACAATCATCGACCATGG CTGATAAAATCGCAGTGGCATTTAGCGATGCAACGGTTGAGATCCCAAGCTGCTTCTATGAATTTGCCCTGCGTTATCCC AAGGCGAATGGCGAGCTGTACACTGGGTTCGTGGCTGCATCAGCCGATAAGATTTTTGAGAGCACCAACGCGAAAAAGGG CTAA
Upstream 100 bases:
>100_bases TACTGAGCGCCGTTGTGCAGCAAGTGGCTAGGGTCGTTACATTGAGTGCGAGCGGCAAAACAATACGCACTATAGTCGCA GCACAATAAAAGGAGTTTTT
Downstream 100 bases:
>100_bases TGAATTAAGGTAGTTGTTGAGTCATCTTAAACAAAAACGCCATCGATAGATGGCGTTTTTATTGGTGGCACTAGAGCAAC ACTCAGAGCAAATAGTTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHFTSLGYVACGDYKFEQKKLVA KHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDEEATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGY RANHFTVSINHLEGFETLESVNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP KANGELYTGFVAASADKIFESTNAKKG
Sequences:
>Translated_267_residues MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHFTSLGYVACGDYKFEQKKLVA KHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDEEATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGY RANHFTVSINHLEGFETLESVNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP KANGELYTGFVAASADKIFESTNAKKG >Mature_267_residues MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHFTSLGYVACGDYKFEQKKLVA KHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDEEATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGY RANHFTVSINHLEGFETLESVNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP KANGELYTGFVAASADKIFESTNAKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29464; Mature: 29464
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHF CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHH TSLGYVACGDYKFEQKKLVAKHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDE HHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH EATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGYRANHFTVSINHLEGFETLES HHHHHCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH VNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP HHHHHHHCCEEEECCCCCCCCCHHHHHCCCHHHHHHHEEEECCCEEEHHHHHHHHHHHCC KANGELYTGFVAASADKIFESTNAKKG CCCCCEEEEEEHHHHHHHHHHCCCCCC >Mature Secondary Structure MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHF CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHH TSLGYVACGDYKFEQKKLVAKHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDE HHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH EATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGYRANHFTVSINHLEGFETLES HHHHHCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH VNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP HHHHHHHCCEEEECCCCCCCCCHHHHHCCCHHHHHHHEEEECCCEEEHHHHHHHHHHHCC KANGELYTGFVAASADKIFESTNAKKG CCCCCEEEEEEHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA