Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919066

Identifier: 117919066

GI number: 117919066

Start: 718878

End: 719681

Strand: Direct

Name: 117919066

Synonym: Shewana3_0613

Alternate gene names: NA

Gene position: 718878-719681 (Clockwise)

Preceding gene: 117919065

Following gene: 117919071

Centisome position: 14.46

GC content: 47.39

Gene sequence:

>804_bases
ATGCACACAGATATCAATGCGTTATTTGCCGCTCTCTGGCAAGACTATATTCAAATGACCCCATCTGCGGCCAAGGTGCA
CGAGCTACTCGGACACGGCAAGCCAATTATCAACGACCATATCGCCCTGCGTACTTTTAACATCGCTAAGGTGAATTTAG
CCGTATTGGCCGAACACTTTACCTCTTTAGGTTATGTGGCTTGTGGTGATTATAAGTTTGAACAGAAAAAACTGGTGGCT
AAGCATTTTGAGCACCCAGATGCGACTCAGCCAAAGGTGTTTATTTCTGAGTTATTGGTGGAAGAGTTTAGCCCATCATT
GCAAAGCACTATCCAAGGTTTGATTGCTCAAGTGGATGAAGAGGCGACTAAAGCAGATAACTTTATCTATTCGGGTCGCC
ATTGGTCACTGGATGCTAAGACCTATGAGACGCTGCTCGAAGAGAGCGAATATGCGGCTTGGGTAGCGGCCTTTGGCTAT
CGTGCGAACCATTTCACTGTCTCTATCAATCACCTCGAGGGCTTCGAGACATTAGAGTCTGTGAATGATGCGCTTAAGCA
AGCGGGCTTTGTGCTGAATAGTGCAGGTGGCGAGATCAAAGGTTCGCCAGAGGTGTTATTGGAACAATCATCGACCATGG
CTGATAAAATCGCAGTGGCATTTAGCGATGCAACGGTTGAGATCCCAAGCTGCTTCTATGAATTTGCCCTGCGTTATCCC
AAGGCGAATGGCGAGCTGTACACTGGGTTCGTGGCTGCATCAGCCGATAAGATTTTTGAGAGCACCAACGCGAAAAAGGG
CTAA

Upstream 100 bases:

>100_bases
TACTGAGCGCCGTTGTGCAGCAAGTGGCTAGGGTCGTTACATTGAGTGCGAGCGGCAAAACAATACGCACTATAGTCGCA
GCACAATAAAAGGAGTTTTT

Downstream 100 bases:

>100_bases
TGAATTAAGGTAGTTGTTGAGTCATCTTAAACAAAAACGCCATCGATAGATGGCGTTTTTATTGGTGGCACTAGAGCAAC
ACTCAGAGCAAATAGTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHFTSLGYVACGDYKFEQKKLVA
KHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDEEATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGY
RANHFTVSINHLEGFETLESVNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP
KANGELYTGFVAASADKIFESTNAKKG

Sequences:

>Translated_267_residues
MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHFTSLGYVACGDYKFEQKKLVA
KHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDEEATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGY
RANHFTVSINHLEGFETLESVNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP
KANGELYTGFVAASADKIFESTNAKKG
>Mature_267_residues
MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHFTSLGYVACGDYKFEQKKLVA
KHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDEEATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGY
RANHFTVSINHLEGFETLESVNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP
KANGELYTGFVAASADKIFESTNAKKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29464; Mature: 29464

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHH
TSLGYVACGDYKFEQKKLVAKHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDE
HHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
EATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGYRANHFTVSINHLEGFETLES
HHHHHCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
VNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP
HHHHHHHCCEEEECCCCCCCCCHHHHHCCCHHHHHHHEEEECCCEEEHHHHHHHHHHHCC
KANGELYTGFVAASADKIFESTNAKKG
CCCCCEEEEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MHTDINALFAALWQDYIQMTPSAAKVHELLGHGKPIINDHIALRTFNIAKVNLAVLAEHF
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEECHHHHHHHHHHHHH
TSLGYVACGDYKFEQKKLVAKHFEHPDATQPKVFISELLVEEFSPSLQSTIQGLIAQVDE
HHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
EATKADNFIYSGRHWSLDAKTYETLLEESEYAAWVAAFGYRANHFTVSINHLEGFETLES
HHHHHCCEEECCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHH
VNDALKQAGFVLNSAGGEIKGSPEVLLEQSSTMADKIAVAFSDATVEIPSCFYEFALRYP
HHHHHHHCCEEEECCCCCCCCCHHHHHCCCHHHHHHHEEEECCCEEEHHHHHHHHHHHCC
KANGELYTGFVAASADKIFESTNAKKG
CCCCCEEEEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA