Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919032
Identifier: 117919032
GI number: 117919032
Start: 680146
End: 680484
Strand: Direct
Name: 117919032
Synonym: Shewana3_0579
Alternate gene names: NA
Gene position: 680146-680484 (Clockwise)
Preceding gene: 117919030
Following gene: 117919033
Centisome position: 13.68
GC content: 50.44
Gene sequence:
>339_bases ATGCCCGCCCCAGATAAGGCTTTATTGATCGAGTTGTTAGAGTTTCCGCGTAAGCGAATTTTGCAGTCAATGGAGGTGAC CCATTGTCCACATGCGGTATTTTTTAATGATCGCGATGAGCAGTGTCTCACTTGCCACCAGGGCATGGAATGTATTTGGA TGAACCAGAACGATGAGCTGGTAGCCGTCGAGCAAAAATCCGTCGCCGAACTTAAGCAGCAGTTGCTGATTGCCGTCGAC TTTATCGACTCTTCCTTAAGCCCACACCATTTGTCGCGCCGCCAATGCCAGTGTGACAATTGCGTTTGGCTGCGCCGGGT ACAAACGGCATTGGCTTAG
Upstream 100 bases:
>100_bases ATCAAGTTAAATCGTATGGAGTCTAGGTAATCTTAAGCACATTGGATGGGATACATTTTTGTTAAATTTCCCGTGGACAA AGTGGATGAAAGGAGGGCAT
Downstream 100 bases:
>100_bases TCATTAACTGTTTACATCTCTATGATTAACTTACGGTATCTGAGATTTTGCATCCACCCGTGAATGCCATTAGAGTAAGG ATAACTTTAGTCATTTGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MPAPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDRDEQCLTCHQGMECIWMNQNDELVAVEQKSVAELKQQLLIAVD FIDSSLSPHHLSRRQCQCDNCVWLRRVQTALA
Sequences:
>Translated_112_residues MPAPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDRDEQCLTCHQGMECIWMNQNDELVAVEQKSVAELKQQLLIAVD FIDSSLSPHHLSRRQCQCDNCVWLRRVQTALA >Mature_111_residues PAPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDRDEQCLTCHQGMECIWMNQNDELVAVEQKSVAELKQQLLIAVDF IDSSLSPHHLSRRQCQCDNCVWLRRVQTALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12974; Mature: 12843
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 6.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDRDEQCLTCHQGMECIWMNQNDEL CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCEEEEECCCCCE VAVEQKSVAELKQQLLIAVDFIDSSLSPHHLSRRQCQCDNCVWLRRVQTALA EEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure PAPDKALLIELLEFPRKRILQSMEVTHCPHAVFFNDRDEQCLTCHQGMECIWMNQNDEL CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCCCEEEEECCCCCE VAVEQKSVAELKQQLLIAVDFIDSSLSPHHLSRRQCQCDNCVWLRRVQTALA EEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA