Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919018
Identifier: 117919018
GI number: 117919018
Start: 658020
End: 659201
Strand: Direct
Name: 117919018
Synonym: Shewana3_0565
Alternate gene names: NA
Gene position: 658020-659201 (Clockwise)
Preceding gene: 117919017
Following gene: 117919019
Centisome position: 13.23
GC content: 49.66
Gene sequence:
>1182_bases ATGACTGTTTTTAACAACCGAATTTCTTTGGTGGCTTTGGCGTGCGCATTTGCTTCACCGACGTTATTTGCCGCTGACTC AAGTTTAACCAATCCGGCTATCAGCGCAGTGCTGAATGGCTATTATCAAACGGCCGAGCGTCCATTGGCTGAAACCGCCG AAGGATTTGGTTTAGGTGAAACTGAGCTGGCGATGAGCGCCAACATTGACGACATGTTCTACGGCAAAGTCACTGCCGTC GTTGAGATGCACGACGGTGAAACTGAGCTTAATCTCGAAGAAGCCTTTATCCAAACCATGGCGATGCCAGCGGGGTTCTC AATCCGTGGCGGACGTTTCTTATCGGATATCGGTTATTTAAATAACCAGCATTTACACACGGATTCATTCACCGACCGTC CTATTGCTTACCGCGCTTTTTTTGGTGGCCATTACTTTGACGACGGTGTGCGCTTAAACTTTGTGGCGCCAACGGATCTG TATTGGACCTTAGGCGCCGAAGCCTTCAAGGGCGACAGCATGCGCGCCGCCGATGAACACGGCGAACGTGAGTTTAAAAA TGTGGGCGTATACACCTTTTACACCAAAATCGGTGGTGACATAGGTGATAACAGTTCATGGCAGGCGGGCTTAAGTTACC TACGTAACGAAAATGGCCAAGTCACAGCCCATGAAGAGGGCGATGAACACGAAGACGAAACCGCCGAGGAAGGCCATGAC CACAGCCATGCGGCATCTTACACAGGTAAAAACACCTATGGTGCTGATTTTGTGTATAAATGGGCGCCAAATGGCAACTA TAAATACCAAAACCTGACCCTGAGCGGCGAGTATTACCGTGTGACGGACTTTGTGCCGAGCGACCTTCATCCCGAAGATG CGCCGAGCAAGGATTATCATCAAGGTTGGTATCTGAGCAGCGTATATCAATTCACGCCTAGCTGGTCTGCGGGTGTGCGT TACGGCGAGGTGGATACCCAAGAGCTCCATGGCGATCATTTCCATGGACAGAAGTTAAAGGAATCTGAGGTGAGTCTGGC GTGGCATTCGAGCCATTTCTCGACGGTACGTTTCCAGTACACCAATCAGAAGGGAACTAACTTCGATGGAATCGAAGACG ACAATGTTTTCACTGTTCAATACATTATGTCTCTGGGGGCTCACGGTGCGCATCAATTCTAA
Upstream 100 bases:
>100_bases GCCACCTACTCTCCGCTAAATCAACTTTTACATTTTAACTTATTGTATTTCTTGATGACTTGGATGAGTCATCGAGCGCT AGTTGTATTTTGGAGATATC
Downstream 100 bases:
>100_bases TTTTGTTAAAGCGGCCGCAGCGGCCCTGTCTTTCGCCTGTTCAGGTTTTGCCCATGCAGAGCTGAATGTGTTTGCCTGTG AACCCGAATATGCCGCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTVFNNRISLVALACAFASPTLFAADSSLTNPAISAVLNGYYQTAERPLAETAEGFGLGETELAMSANIDDMFYGKVTAV VEMHDGETELNLEEAFIQTMAMPAGFSIRGGRFLSDIGYLNNQHLHTDSFTDRPIAYRAFFGGHYFDDGVRLNFVAPTDL YWTLGAEAFKGDSMRAADEHGEREFKNVGVYTFYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGDEHEDETAEEGHD HSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYYRVTDFVPSDLHPEDAPSKDYHQGWYLSSVYQFTPSWSAGVR YGEVDTQELHGDHFHGQKLKESEVSLAWHSSHFSTVRFQYTNQKGTNFDGIEDDNVFTVQYIMSLGAHGAHQF
Sequences:
>Translated_393_residues MTVFNNRISLVALACAFASPTLFAADSSLTNPAISAVLNGYYQTAERPLAETAEGFGLGETELAMSANIDDMFYGKVTAV VEMHDGETELNLEEAFIQTMAMPAGFSIRGGRFLSDIGYLNNQHLHTDSFTDRPIAYRAFFGGHYFDDGVRLNFVAPTDL YWTLGAEAFKGDSMRAADEHGEREFKNVGVYTFYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGDEHEDETAEEGHD HSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYYRVTDFVPSDLHPEDAPSKDYHQGWYLSSVYQFTPSWSAGVR YGEVDTQELHGDHFHGQKLKESEVSLAWHSSHFSTVRFQYTNQKGTNFDGIEDDNVFTVQYIMSLGAHGAHQF >Mature_392_residues TVFNNRISLVALACAFASPTLFAADSSLTNPAISAVLNGYYQTAERPLAETAEGFGLGETELAMSANIDDMFYGKVTAVV EMHDGETELNLEEAFIQTMAMPAGFSIRGGRFLSDIGYLNNQHLHTDSFTDRPIAYRAFFGGHYFDDGVRLNFVAPTDLY WTLGAEAFKGDSMRAADEHGEREFKNVGVYTFYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGDEHEDETAEEGHDH SHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYYRVTDFVPSDLHPEDAPSKDYHQGWYLSSVYQFTPSWSAGVRY GEVDTQELHGDHFHGQKLKESEVSLAWHSSHFSTVRFQYTNQKGTNFDGIEDDNVFTVQYIMSLGAHGAHQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43869; Mature: 43738
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVFNNRISLVALACAFASPTLFAADSSLTNPAISAVLNGYYQTAERPLAETAEGFGLGE CCEECCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC TELAMSANIDDMFYGKVTAVVEMHDGETELNLEEAFIQTMAMPAGFSIRGGRFLSDIGYL HHEEEECCCCHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHCC NNQHLHTDSFTDRPIAYRAFFGGHYFDDGVRLNFVAPTDLYWTLGAEAFKGDSMRAADEH CCCEEECCCCCCCCEEEEEEECCEEECCCEEEEEECCCCEEEECCCHHHCCCCCCCHHHH GEREFKNVGVYTFYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGDEHEDETAEEGHD HHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCC HSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYYRVTDFVPSDLHPEDAPSKDYH CCHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCC QGWYLSSVYQFTPSWSAGVRYGEVDTQELHGDHFHGQKLKESEVSLAWHSSHFSTVRFQY CCEEEEHHEEECCCHHHCEEECCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE TNQKGTNFDGIEDDNVFTVQYIMSLGAHGAHQF ECCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCC >Mature Secondary Structure TVFNNRISLVALACAFASPTLFAADSSLTNPAISAVLNGYYQTAERPLAETAEGFGLGE CEECCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCC TELAMSANIDDMFYGKVTAVVEMHDGETELNLEEAFIQTMAMPAGFSIRGGRFLSDIGYL HHEEEECCCCHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECCCCHHHHHHCC NNQHLHTDSFTDRPIAYRAFFGGHYFDDGVRLNFVAPTDLYWTLGAEAFKGDSMRAADEH CCCEEECCCCCCCCEEEEEEECCEEECCCEEEEEECCCCEEEECCCHHHCCCCCCCHHHH GEREFKNVGVYTFYTKIGGDIGDNSSWQAGLSYLRNENGQVTAHEEGDEHEDETAEEGHD HHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCC HSHAASYTGKNTYGADFVYKWAPNGNYKYQNLTLSGEYYRVTDFVPSDLHPEDAPSKDYH CCHHHCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCC QGWYLSSVYQFTPSWSAGVRYGEVDTQELHGDHFHGQKLKESEVSLAWHSSHFSTVRFQY CCEEEEHHEEECCCHHHCEEECCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEEEEE TNQKGTNFDGIEDDNVFTVQYIMSLGAHGAHQF ECCCCCCCCCCCCCCEEEHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]