Click here to switch to the map view.

The map label for this gene is 117919017

Identifier: 117919017

GI number: 117919017

Start: 657648

End: 657938

Strand: Direct

Name: 117919017

Synonym: Shewana3_0564

Alternate gene names: NA

Gene position: 657648-657938 (Clockwise)

Preceding gene: 117919015

Following gene: 117919018

Centisome position: 13.23

GC content: 50.17

Gene sequence:

>291_bases
GTGAGACTGCACAGTCACATAAGACGCACAATTTCGATATGGCTTGCCGCCGTATTGGTGTTGCTGTCTTTTGTTGCCTC
AGCCCATAGTGTGACCCACCTTGATGATGGGGCAAAGACGCACTGTACCCTGTGCTTCCATCAACATCAGCTGAATAAAA
TTCTGCTCACCCAACCGCTTAAGCTCGATTTAGCGGTACAGCGGTTCGATGTCTGTGAATTTGTCTTACCCGTTAGCTTC
TCCACACACGTCAGTGTTTACCTAAGCCGCGCGCCACCTACTCTCCGCTAA

Upstream 100 bases:

>100_bases
GGTAAATATCTTGTAACGCATTGGGCGCCTATTACCTTATTGCAACTTGCTAGTGGCCTGACTTAAACTTGTGCCACTTT
TTTACTATGGGGACGACTGA

Downstream 100 bases:

>100_bases
ATCAACTTTTACATTTTAACTTATTGTATTTCTTGATGACTTGGATGAGTCATCGAGCGCTAGTTGTATTTTGGAGATAT
CATGACTGTTTTTAACAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRLHSHIRRTISIWLAAVLVLLSFVASAHSVTHLDDGAKTHCTLCFHQHQLNKILLTQPLKLDLAVQRFDVCEFVLPVSF
STHVSVYLSRAPPTLR

Sequences:

>Translated_96_residues
MRLHSHIRRTISIWLAAVLVLLSFVASAHSVTHLDDGAKTHCTLCFHQHQLNKILLTQPLKLDLAVQRFDVCEFVLPVSF
STHVSVYLSRAPPTLR
>Mature_96_residues
MRLHSHIRRTISIWLAAVLVLLSFVASAHSVTHLDDGAKTHCTLCFHQHQLNKILLTQPLKLDLAVQRFDVCEFVLPVSF
STHVSVYLSRAPPTLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10868; Mature: 10868

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLHSHIRRTISIWLAAVLVLLSFVASAHSVTHLDDGAKTHCTLCFHQHQLNKILLTQPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCEECCCCC
KLDLAVQRFDVCEFVLPVSFSTHVSVYLSRAPPTLR
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MRLHSHIRRTISIWLAAVLVLLSFVASAHSVTHLDDGAKTHCTLCFHQHQLNKILLTQPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHCCEECCCCC
KLDLAVQRFDVCEFVLPVSFSTHVSVYLSRAPPTLR
CHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA