Click here to switch to the map view.

The map label for this gene is 117919006

Identifier: 117919006

GI number: 117919006

Start: 646160

End: 646684

Strand: Direct

Name: 117919006

Synonym: Shewana3_0553

Alternate gene names: NA

Gene position: 646160-646684 (Clockwise)

Preceding gene: 117919003

Following gene: 117919009

Centisome position: 13.0

GC content: 44.57

Gene sequence:

>525_bases
ATGAAAGTTCAGTTCCTATTACTCGCCAGTGTGTTGAGTTGCAGTGCTGTATGGGCCGCAGACGAGGCGAAAACCGACCC
AGTGACAGAAGATGGGGTGGTTAAGATTGTTTGGCAAAACCCAAAAGATTTCCGTGATATTAAGTCATCGGGCGAAATTC
AGTCCCGTTATGAACAGCGTTTATTTGATACTTTAACTACGAATATCAATAAAGAAGCGGCAAAAGTCTTAAAACCGAAT
CAAAAGTTAGAGATGACGGTGACCGATGTCGATCTCGCCGGGGATATGCGTCCAACCTTTGGGGCAACCGCCGATGATTT
ACGGGTGATCAAAGAGATCTATCCGCCGCGCATGACCTTTAGTTATCAAGTGCTTGAAAATGACAAAGTCATCATCGCCG
GGGATGAAAAGCTCTCCGATATGGGCTTTATGACGGGCATTCAGCCGTTAAATGACAAGCCATTTAACTATGAAACCAAA
ATGCTAAGTGATTGGTTAAAAAAGACCGTTGCACCGAAACTCTAG

Upstream 100 bases:

>100_bases
CTTAGTCTATGCTGTCATAAATACGATTTTGCATTAAGCTGAAGTTCAGGTTAGATTTTGTACGGTATATGGCAGAAACA
ATGAGGCCTAGGAGGCAAAT

Downstream 100 bases:

>100_bases
GCTGATAATTCCAGCCTAGGCACTCAATGCTTGGGGGCTTATGTCTCTCTCTTCTAACAGGCAAAATCCGTTACTCGCGG
ATTTTGCCTGTTTTTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKVQFLLLASVLSCSAVWAADEAKTDPVTEDGVVKIVWQNPKDFRDIKSSGEIQSRYEQRLFDTLTTNINKEAAKVLKPN
QKLEMTVTDVDLAGDMRPTFGATADDLRVIKEIYPPRMTFSYQVLENDKVIIAGDEKLSDMGFMTGIQPLNDKPFNYETK
MLSDWLKKTVAPKL

Sequences:

>Translated_174_residues
MKVQFLLLASVLSCSAVWAADEAKTDPVTEDGVVKIVWQNPKDFRDIKSSGEIQSRYEQRLFDTLTTNINKEAAKVLKPN
QKLEMTVTDVDLAGDMRPTFGATADDLRVIKEIYPPRMTFSYQVLENDKVIIAGDEKLSDMGFMTGIQPLNDKPFNYETK
MLSDWLKKTVAPKL
>Mature_174_residues
MKVQFLLLASVLSCSAVWAADEAKTDPVTEDGVVKIVWQNPKDFRDIKSSGEIQSRYEQRLFDTLTTNINKEAAKVLKPN
QKLEMTVTDVDLAGDMRPTFGATADDLRVIKEIYPPRMTFSYQVLENDKVIIAGDEKLSDMGFMTGIQPLNDKPFNYETK
MLSDWLKKTVAPKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19667; Mature: 19667

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVQFLLLASVLSCSAVWAADEAKTDPVTEDGVVKIVWQNPKDFRDIKSSGEIQSRYEQR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHH
LFDTLTTNINKEAAKVLKPNQKLEMTVTDVDLAGDMRPTFGATADDLRVIKEIYPPRMTF
HHHHHHCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEE
SYQVLENDKVIIAGDEKLSDMGFMTGIQPLNDKPFNYETKMLSDWLKKTVAPKL
EEEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVQFLLLASVLSCSAVWAADEAKTDPVTEDGVVKIVWQNPKDFRDIKSSGEIQSRYEQR
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCHHHHHHHHH
LFDTLTTNINKEAAKVLKPNQKLEMTVTDVDLAGDMRPTFGATADDLRVIKEIYPPRMTF
HHHHHHCCCCHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEE
SYQVLENDKVIIAGDEKLSDMGFMTGIQPLNDKPFNYETKMLSDWLKKTVAPKL
EEEEECCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA