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The map label for this gene is ybaP [C]

Identifier: 117919009

GI number: 117919009

Start: 648950

End: 649846

Strand: Direct

Name: ybaP [C]

Synonym: Shewana3_0556

Alternate gene names: 117919009

Gene position: 648950-649846 (Clockwise)

Preceding gene: 117919006

Following gene: 117919011

Centisome position: 13.05

GC content: 52.73

Gene sequence:

>897_bases
ATGGCAACAAGTCGATGGCGACTATTACTGGCGCTGTGCGGCGTCGCAATGTTTACCAGTGCGTCGGGTTGGGCGGCACA
GACGGATAAACCGCCGTTTTATCAGGTGCAATGGCAGGGGAAATCCGCTTACCTTTTGGGCTCGATTCATATCGGCCGTG
CCGATTTTTATCCTATGCCGGCGCAAGTGGAAGCGGCATTTACCAAGTCCAAGGGATTGGTGGTTGAAATCGATACCAAT
AAAATCGACAGCCGTGCCCTATTGCAAAAGTATGGTATGGCGACTCACGCACAGGGGCTAGATTGGCAGAGCCGGGACAA
ACAAACGATAGAGGTGATGCGCCACTATTGTGAAGACAAAGCAAGCCTATGCCAGTCGATTCAAGCCTTTGCGCCTTGGT
TGCAGGCATCTCAACTTAATCTACTGCGCTACAATAGCTTAGGTTTTAGCACCGACTATGGTGTCGATATGCAGTTGCTT
GGCCGTGCGGGTAAGCCTGTGTATCAGCTAGAGACGGCTGAGTCGCAGTTCCAATTACTGTCCTCCTTCGATAGCCAAGT
TCAGTGGTCTATGGTGCGCGAAGCCATTAATGCCTCTGATGCCGAACTACTCTCACTGGTTGAGGCGTGGCGCTCCGGTG
ATGAAACTGCGCTGGATACTTTGATGCAGGAGCAGCTCGGCGGGGAGGGCGACACCCTGATGCTGGATAAAATTCTCTGG
CAGCGCAATAAAGTCATGGCCGATGGCATGATGAGGTTAATGACCGCAGAAGCCACCAGTGAACCGCTATTTGTGGTGGT
GGGCGCTGGCCATGTGGTGGGTGATAAAAGCGTGGTGCAACTGCTTAAACAGAAGGGCGCAACCGTAACCGCCTGTTGGC
GTGATCAATGTGACTGA

Upstream 100 bases:

>100_bases
AGGCGATTTGAAGATTTTCTTTCAGTTGCTCTATAACCTTAGTGTGTGGCATAACAGCGTCTCATTGCAAAATTTGCAGG
AATTATAAGGGGCAAAGGAT

Downstream 100 bases:

>100_bases
TATAGCTATATGACGGATGATTGGGGGGATTCTGGATTTGAACGCACTGGGGTTGAATACACTTAGTGCACAGAACTAGG
GTCGAATCATCTGGTGATGA

Product: GumN family protein

Products: NA

Alternate protein names: GumN Protein; Gumn Family Protein; Lipoprotein

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MATSRWRLLLALCGVAMFTSASGWAAQTDKPPFYQVQWQGKSAYLLGSIHIGRADFYPMPAQVEAAFTKSKGLVVEIDTN
KIDSRALLQKYGMATHAQGLDWQSRDKQTIEVMRHYCEDKASLCQSIQAFAPWLQASQLNLLRYNSLGFSTDYGVDMQLL
GRAGKPVYQLETAESQFQLLSSFDSQVQWSMVREAINASDAELLSLVEAWRSGDETALDTLMQEQLGGEGDTLMLDKILW
QRNKVMADGMMRLMTAEATSEPLFVVVGAGHVVGDKSVVQLLKQKGATVTACWRDQCD

Sequences:

>Translated_298_residues
MATSRWRLLLALCGVAMFTSASGWAAQTDKPPFYQVQWQGKSAYLLGSIHIGRADFYPMPAQVEAAFTKSKGLVVEIDTN
KIDSRALLQKYGMATHAQGLDWQSRDKQTIEVMRHYCEDKASLCQSIQAFAPWLQASQLNLLRYNSLGFSTDYGVDMQLL
GRAGKPVYQLETAESQFQLLSSFDSQVQWSMVREAINASDAELLSLVEAWRSGDETALDTLMQEQLGGEGDTLMLDKILW
QRNKVMADGMMRLMTAEATSEPLFVVVGAGHVVGDKSVVQLLKQKGATVTACWRDQCD
>Mature_297_residues
ATSRWRLLLALCGVAMFTSASGWAAQTDKPPFYQVQWQGKSAYLLGSIHIGRADFYPMPAQVEAAFTKSKGLVVEIDTNK
IDSRALLQKYGMATHAQGLDWQSRDKQTIEVMRHYCEDKASLCQSIQAFAPWLQASQLNLLRYNSLGFSTDYGVDMQLLG
RAGKPVYQLETAESQFQLLSSFDSQVQWSMVREAINASDAELLSLVEAWRSGDETALDTLMQEQLGGEGDTLMLDKILWQ
RNKVMADGMMRLMTAEATSEPLFVVVGAGHVVGDKSVVQLLKQKGATVTACWRDQCD

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786689, Length=263, Percent_Identity=23.9543726235741, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33124; Mature: 32993

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSRWRLLLALCGVAMFTSASGWAAQTDKPPFYQVQWQGKSAYLLGSIHIGRADFYPMP
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCC
AQVEAAFTKSKGLVVEIDTNKIDSRALLQKYGMATHAQGLDWQSRDKQTIEVMRHYCEDK
CHHHHHEECCCCEEEEECCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
ASLCQSIQAFAPWLQASQLNLLRYNSLGFSTDYGVDMQLLGRAGKPVYQLETAESQFQLL
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHH
SSFDSQVQWSMVREAINASDAELLSLVEAWRSGDETALDTLMQEQLGGEGDTLMLDKILW
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHH
QRNKVMADGMMRLMTAEATSEPLFVVVGAGHVVGDKSVVQLLKQKGATVTACWRDQCD
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure 
ATSRWRLLLALCGVAMFTSASGWAAQTDKPPFYQVQWQGKSAYLLGSIHIGRADFYPMP
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCC
AQVEAAFTKSKGLVVEIDTNKIDSRALLQKYGMATHAQGLDWQSRDKQTIEVMRHYCEDK
CHHHHHEECCCCEEEEECCCCCHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
ASLCQSIQAFAPWLQASQLNLLRYNSLGFSTDYGVDMQLLGRAGKPVYQLETAESQFQLL
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCEEEEHHHHHHHHHH
SSFDSQVQWSMVREAINASDAELLSLVEAWRSGDETALDTLMQEQLGGEGDTLMLDKILW
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHH
QRNKVMADGMMRLMTAEATSEPLFVVVGAGHVVGDKSVVQLLKQKGATVTACWRDQCD
HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEECCHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA