Click here to switch to the map view.

The map label for this gene is 117918917

Identifier: 117918917

GI number: 117918917

Start: 536352

End: 536777

Strand: Direct

Name: 117918917

Synonym: Shewana3_0461

Alternate gene names: NA

Gene position: 536352-536777 (Clockwise)

Preceding gene: 117918916

Following gene: 117918918

Centisome position: 10.79

GC content: 47.42

Gene sequence:

>426_bases
ATGAAGGGAGCGGGAGGAACACAGGGCGGTATTGGCCAATTTTTTATTGGACTTGCCATGATGTGTGCAGGATTTTATCT
GTTATTCAATGCGATACAGGTCAGTTCCAGTTTTGGCTTGGGCTATGGTCTCTACCGCATGAATGCCTTTGGGCAGGGAT
TTTCTATCACCACAGGTATGGTGATGCTGCCGTTTATCCTCGGGATAGTGATGGTGTTTTTTGATGCCAAGACTAAGCTC
GGTTGGCTGCTTACCTTAGGCTCATTAGTCGCCTTAATTGTCGGGGTGATAAGCTCGATTCAGTTTCACTTTAGGGCCAT
GTCGGCCTTCGATTTGATCGTGATTTTAGTGTTGGCCTTTGGTGGGCTCGGGTTGTTTTTACGCTCGTTAAAAGCGACGC
CCGCCGAGCAGAATGATCCTAAATAA

Upstream 100 bases:

>100_bases
AGTTGGCAGCCCACGAAAAGGCTAAAAAGGCTGCAGAGGACCAACAGCTTAAAGAAGCTGTCGACAGAGCGATTCAACAA
CGTCAATAGAAAGGATTGGT

Downstream 100 bases:

>100_bases
CGGCTACACTGAAATCTAGTTCCCATACCCATAGCCTAGGAAATCCAATGCGTTGGCGTGACAGTGACCGTAGCTCCAAT
ATCGAAGACAGACGTGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGMVMLPFILGIVMVFFDAKTKL
GWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAFGGLGLFLRSLKATPAEQNDPK

Sequences:

>Translated_141_residues
MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGMVMLPFILGIVMVFFDAKTKL
GWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAFGGLGLFLRSLKATPAEQNDPK
>Mature_141_residues
MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGMVMLPFILGIVMVFFDAKTKL
GWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAFGGLGLFLRSLKATPAEQNDPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15019; Mature: 15019

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH
VMLPFILGIVMVFFDAKTKLGWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLGLFLRSLKATPAEQNDPK
HHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKGAGGTQGGIGQFFIGLAMMCAGFYLLFNAIQVSSSFGLGYGLYRMNAFGQGFSITTGM
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH
VMLPFILGIVMVFFDAKTKLGWLLTLGSLVALIVGVISSIQFHFRAMSAFDLIVILVLAF
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLGLFLRSLKATPAEQNDPK
HHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA