Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918916
Identifier: 117918916
GI number: 117918916
Start: 536107
End: 536340
Strand: Direct
Name: 117918916
Synonym: Shewana3_0460
Alternate gene names: NA
Gene position: 536107-536340 (Clockwise)
Preceding gene: 117918910
Following gene: 117918917
Centisome position: 10.78
GC content: 51.71
Gene sequence:
>234_bases ATGAAAACCCCTTTGATTATGTTAGTCTTGTCCGCATCACTGTTGACCTCTGCCTGCGCCGAGTTAGCCTGTTCTGCCCG GACGGATGTCGACCCCTACGAGCCTATGCTAGATAAACAGCGCTGCGTGACCGAGGCGGATAAACAGTTGGCAGCCCACG AAAAGGCTAAAAAGGCTGCAGAGGACCAACAGCTTAAAGAAGCTGTCGACAGAGCGATTCAACAACGTCAATAG
Upstream 100 bases:
>100_bases GATCTGTGTCAACATGGTTGAGCACATAATCGATACAGCTCAAGTAAAGCTTGCCAATGTTAGCTTGGTTAAGTGTAGCT ATTTTGTTGAGGAGCCGAAG
Downstream 100 bases:
>100_bases AAAGGATTGGTATGAAGGGAGCGGGAGGAACACAGGGCGGTATTGGCCAATTTTTTATTGGACTTGCCATGATGTGTGCA GGATTTTATCTGTTATTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVTEADKQLAAHEKAKKAAEDQQLKEAVDRAIQQRQ
Sequences:
>Translated_77_residues MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVTEADKQLAAHEKAKKAAEDQQLKEAVDRAIQQRQ >Mature_77_residues MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVTEADKQLAAHEKAKKAAEDQQLKEAVDRAIQQRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8515; Mature: 8515
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVTEADKQLAAHEKAKKAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EDQQLKEAVDRAIQQRQ HHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTPLIMLVLSASLLTSACAELACSARTDVDPYEPMLDKQRCVTEADKQLAAHEKAKKAA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH EDQQLKEAVDRAIQQRQ HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA