| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is rhlB [H]
Identifier: 117918867
GI number: 117918867
Start: 469247
End: 470566
Strand: Direct
Name: rhlB [H]
Synonym: Shewana3_0410
Alternate gene names: 117918867
Gene position: 469247-470566 (Clockwise)
Preceding gene: 117918864
Following gene: 117918868
Centisome position: 9.44
GC content: 48.33
Gene sequence:
>1320_bases ATGAGCCAAACACATTTATCTAATCAAAAATTTGCCGACCTTCCTCTGCATCCAGAGGTTAAACAGGCACTTGCCGAAAA CGGCTTTGAATTTTGTACGCCGATTCAGGCGTTATCATTACCCGTATTACTTCAATCAAAAGATATCGCCGGCCAAGCCC AAACGGGCACGGGTAAGACAATGGCGTTTTTGGTTGCCACATTTAACCATTTATTGTCGACGCCTGTCCCTGAAAACCGT CAGTTAAATCAGCCGCGCGCCATCATTATGGCTCCTACCCGTGAGCTGGCGATTCAAATCGCCAAAGACGCGATTCTCCT TGCCAAACACAGCCACTTAAAAGTGGGCATTGTTTATGGCGGTGAAAGCTATGATGTGCAGCGCAAGACGCTCGATCAAG GTGTAGACATTCTGATTGGTACCACAGGTCGGATTATCGACTACGTGCGCCAAGGCATTATCAATCTCGGCGGTATTCAA GCGGTTGTGCTAGATGAAGCCGATCGCATGTTCGACCTCGGTTTTATTAAGGATATTCGTTTCTTATTCCGACGTATGCC CAGTGCCGATCAGCGTCTGAATATGCTGTTTTCGGCGACACTTTCGATGAAGGTGCAAGAACTCGCCTACGATCATATGA ATGAACCTGTGAAAGTCGAAATAGCCCCCGAAGAAAAAACCTCCAAGAACATCAAAGAAGAAATTTTCTATCCTTCCCAA GAAGACAAAATGCGTTTGCTGCTGACGCTGATTGAAGAAGATTGGCCAGAGAAAGCCATTGTTTTTTCAAACACTAAGCA CAGCTGTGAAAACCTATGGTCTTGGCTTGAAGGGGATGGCCATCGTGTCGGCCTGCTGACGGGCGATGTGCCGCAGAAGA AGCGTATTCGCATTCTCGAGCAATTCACTCAAGGCCAATTGGATATTCTGGTCGCGACCGACGTTGCGGCGCGCGGACTG CATATCTCCGATGTTTCCCACGTCTACAATTATGATTTACCTGATGATTGTGAAGATTACGTTCATCGTATTGGTCGTAC TGGGCGTGCGGGTAACAAAGGTGTATCGGTCAGTTTTGCCTGTGAAGAATACGCTCTGAATTTGCCAGCGATTGAAACCT ACATCAATCACTCTATTCCTGTGAGTAATTATGACCGTGATGCCTTGCTGGAAGATATTCCGCCGCCGGTCAAAATTCAT CGCAGGCACCCTGCGGGAGCACGTAATTTACGTGAACGCTCAGGTGCAGGGCGACCACAAGGTGCCCATCGTAGTGGTGG ACGTCCACCTCGCCATGACAGGACGCGTAGACAGCCTTAA
Upstream 100 bases:
>100_bases TATTGGGGCTGAAAAATAGCTTTTCAAGTTACCTTTTTACAATGTGGCTATTTCAAACGATCGAGTATCTTATTGCAACC CCAAATGGTATGCTTGCGCT
Downstream 100 bases:
>100_bases ATGCCAACACCCGCTTATGCCGCCATTACTTTAGGCTCTAATAGCTTTAATATGCTGATCGCTAAGACAAAAGGCGGTCA GCCACAGATTATTGCTAAAT
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSQTHLSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPVPENR QLNQPRAIIMAPTRELAIQIAKDAILLAKHSHLKVGIVYGGESYDVQRKTLDQGVDILIGTTGRIIDYVRQGIINLGGIQ AVVLDEADRMFDLGFIKDIRFLFRRMPSADQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGL HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEEYALNLPAIETYINHSIPVSNYDRDALLEDIPPPVKIH RRHPAGARNLRERSGAGRPQGAHRSGGRPPRHDRTRRQP
Sequences:
>Translated_439_residues MSQTHLSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPVPENR QLNQPRAIIMAPTRELAIQIAKDAILLAKHSHLKVGIVYGGESYDVQRKTLDQGVDILIGTTGRIIDYVRQGIINLGGIQ AVVLDEADRMFDLGFIKDIRFLFRRMPSADQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGL HISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEEYALNLPAIETYINHSIPVSNYDRDALLEDIPPPVKIH RRHPAGARNLRERSGAGRPQGAHRSGGRPPRHDRTRRQP >Mature_438_residues SQTHLSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKTMAFLVATFNHLLSTPVPENRQ LNQPRAIIMAPTRELAIQIAKDAILLAKHSHLKVGIVYGGESYDVQRKTLDQGVDILIGTTGRIIDYVRQGIINLGGIQA VVLDEADRMFDLGFIKDIRFLFRRMPSADQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQE DKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLH ISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFACEEYALNLPAIETYINHSIPVSNYDRDALLEDIPPPVKIHR RHPAGARNLRERSGAGRPQGAHRSGGRPPRHDRTRRQP
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=36.9565217391304, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=36.9565217391304, Blast_Score=236, Evalue=3e-62, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=36.9565217391304, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI41327771, Length=403, Percent_Identity=35.7320099255583, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI169881239, Length=373, Percent_Identity=36.7292225201072, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI13514809, Length=373, Percent_Identity=36.7292225201072, Blast_Score=232, Evalue=4e-61, Organism=Homo sapiens, GI222352149, Length=372, Percent_Identity=38.9784946236559, Blast_Score=231, Evalue=8e-61, Organism=Homo sapiens, GI148613856, Length=352, Percent_Identity=38.0681818181818, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI38201710, Length=352, Percent_Identity=38.0681818181818, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI262118318, Length=354, Percent_Identity=35.0282485875706, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI216548263, Length=354, Percent_Identity=35.0282485875706, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI262231852, Length=354, Percent_Identity=35.0282485875706, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI13518015, Length=354, Percent_Identity=35.0282485875706, Blast_Score=218, Evalue=9e-57, Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=33.0729166666667, Blast_Score=215, Evalue=7e-56, Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=37.1104815864023, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=35.6125356125356, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=35.6125356125356, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=33.2432432432432, Blast_Score=209, Evalue=5e-54, Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=35.8333333333333, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI55749865, Length=371, Percent_Identity=34.2318059299191, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=36.3636363636364, Blast_Score=196, Evalue=3e-50, Organism=Homo sapiens, GI50659095, Length=428, Percent_Identity=33.411214953271, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI164664518, Length=388, Percent_Identity=31.4432989690722, Blast_Score=192, Evalue=4e-49, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=31.8302387267904, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=31.8302387267904, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI20149629, Length=375, Percent_Identity=32.5333333333333, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI13129006, Length=365, Percent_Identity=34.2465753424658, Blast_Score=185, Evalue=7e-47, Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=34.6456692913386, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI4758112, Length=366, Percent_Identity=31.1475409836066, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI18375623, Length=366, Percent_Identity=31.1475409836066, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI6005743, Length=385, Percent_Identity=32.2077922077922, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI21040371, Length=366, Percent_Identity=31.1475409836066, Blast_Score=178, Evalue=1e-44, Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=32.2077922077922, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI188035877, Length=347, Percent_Identity=31.4121037463977, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=32.9758713136729, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI62241022, Length=364, Percent_Identity=32.4175824175824, Blast_Score=168, Evalue=7e-42, Organism=Homo sapiens, GI4503529, Length=373, Percent_Identity=32.9758713136729, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI38327634, Length=340, Percent_Identity=32.6470588235294, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI38569503, Length=379, Percent_Identity=29.287598944591, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI31542656, Length=403, Percent_Identity=31.2655086848635, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI164419732, Length=367, Percent_Identity=32.425068119891, Blast_Score=165, Evalue=7e-41, Organism=Homo sapiens, GI38569505, Length=374, Percent_Identity=29.144385026738, Blast_Score=165, Evalue=8e-41, Organism=Homo sapiens, GI62241024, Length=343, Percent_Identity=32.3615160349854, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI13514831, Length=350, Percent_Identity=29.4285714285714, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI17505907, Length=447, Percent_Identity=29.3064876957494, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI41327776, Length=375, Percent_Identity=30.1333333333333, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI9506931, Length=403, Percent_Identity=29.2803970223325, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI256223453, Length=361, Percent_Identity=29.6398891966759, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI256773275, Length=391, Percent_Identity=28.6445012787724, Blast_Score=143, Evalue=3e-34, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=27.0531400966184, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=29.3929712460064, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.0650887573964, Blast_Score=129, Evalue=5e-30, Organism=Homo sapiens, GI20336298, Length=248, Percent_Identity=32.258064516129, Blast_Score=119, Evalue=5e-27, Organism=Escherichia coli, GI1790214, Length=427, Percent_Identity=67.4473067915691, Blast_Score=596, Evalue=1e-171, Organism=Escherichia coli, GI1787016, Length=370, Percent_Identity=39.1891891891892, Blast_Score=271, Evalue=6e-74, Organism=Escherichia coli, GI87082221, Length=371, Percent_Identity=38.8140161725067, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1788930, Length=365, Percent_Identity=37.2602739726027, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI1787605, Length=351, Percent_Identity=36.4672364672365, Blast_Score=216, Evalue=3e-57, Organism=Caenorhabditis elegans, GI17510309, Length=363, Percent_Identity=40.771349862259, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17510307, Length=363, Percent_Identity=40.771349862259, Blast_Score=248, Evalue=7e-66, Organism=Caenorhabditis elegans, GI71995514, Length=363, Percent_Identity=40.771349862259, Blast_Score=247, Evalue=8e-66, Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=39.6694214876033, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=35.6200527704486, Blast_Score=218, Evalue=4e-57, Organism=Caenorhabditis elegans, GI17507877, Length=381, Percent_Identity=35.4330708661417, Blast_Score=211, Evalue=9e-55, Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=32.7027027027027, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=32.7027027027027, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507879, Length=381, Percent_Identity=35.1706036745407, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17507945, Length=335, Percent_Identity=36.1194029850746, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI86570094, Length=343, Percent_Identity=37.3177842565598, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI115533224, Length=433, Percent_Identity=31.1778290993072, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI71987143, Length=374, Percent_Identity=33.6898395721925, Blast_Score=204, Evalue=9e-53, Organism=Caenorhabditis elegans, GI17552642, Length=421, Percent_Identity=33.0166270783848, Blast_Score=203, Evalue=1e-52, Organism=Caenorhabditis elegans, GI17510559, Length=425, Percent_Identity=31.0588235294118, Blast_Score=199, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=34.2245989304813, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=32.4022346368715, Blast_Score=188, Evalue=5e-48, Organism=Caenorhabditis elegans, GI17537549, Length=347, Percent_Identity=37.1757925072046, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI115532548, Length=389, Percent_Identity=30.3341902313625, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI115532546, Length=389, Percent_Identity=30.3341902313625, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17509811, Length=383, Percent_Identity=31.8537859007833, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=32.1525885558583, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71999646, Length=381, Percent_Identity=30.1837270341207, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=30.2139037433155, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI71999644, Length=386, Percent_Identity=29.7927461139896, Blast_Score=172, Evalue=3e-43, Organism=Caenorhabditis elegans, GI17536099, Length=413, Percent_Identity=32.2033898305085, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI17536101, Length=413, Percent_Identity=32.2033898305085, Blast_Score=167, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17505370, Length=356, Percent_Identity=34.2696629213483, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17536103, Length=410, Percent_Identity=32.6829268292683, Blast_Score=166, Evalue=3e-41, Organism=Caenorhabditis elegans, GI193208216, Length=374, Percent_Identity=32.620320855615, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI17508543, Length=388, Percent_Identity=27.5773195876289, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71990816, Length=354, Percent_Identity=33.3333333333333, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17507641, Length=392, Percent_Identity=30.8673469387755, Blast_Score=151, Evalue=5e-37, Organism=Caenorhabditis elegans, GI32564046, Length=374, Percent_Identity=30.7486631016043, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI193206561, Length=361, Percent_Identity=29.0858725761773, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=25.2427184466019, Blast_Score=127, Evalue=8e-30, Organism=Caenorhabditis elegans, GI17556951, Length=351, Percent_Identity=28.4900284900285, Blast_Score=122, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17553716, Length=369, Percent_Identity=27.6422764227642, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=27.5757575757576, Blast_Score=111, Evalue=8e-25, Organism=Caenorhabditis elegans, GI71997889, Length=499, Percent_Identity=25.4509018036072, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=30.2884615384615, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=45.360824742268, Blast_Score=93, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=39.8328690807799, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6324778, Length=416, Percent_Identity=36.2980769230769, Blast_Score=246, Evalue=5e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=392, Percent_Identity=36.2244897959184, Blast_Score=229, Evalue=9e-61, Organism=Saccharomyces cerevisiae, GI6321360, Length=338, Percent_Identity=37.2781065088757, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=34.9030470914127, Blast_Score=206, Evalue=5e-54, Organism=Saccharomyces cerevisiae, GI6320041, Length=438, Percent_Identity=30.1369863013699, Blast_Score=201, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=33.9378238341969, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=357, Percent_Identity=34.453781512605, Blast_Score=192, Evalue=6e-50, Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=34.1736694677871, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6320224, Length=376, Percent_Identity=31.3829787234043, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=373, Percent_Identity=34.0482573726542, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6322323, Length=373, Percent_Identity=34.0482573726542, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=393, Percent_Identity=32.3155216284987, Blast_Score=178, Evalue=1e-45, Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=33.2402234636872, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=393, Percent_Identity=31.5521628498728, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6321111, Length=369, Percent_Identity=29.810298102981, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6320119, Length=355, Percent_Identity=29.5774647887324, Blast_Score=163, Evalue=6e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=427, Percent_Identity=29.7423887587822, Blast_Score=159, Evalue=8e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=378, Percent_Identity=31.4814814814815, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6320173, Length=436, Percent_Identity=28.4403669724771, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6319714, Length=356, Percent_Identity=28.9325842696629, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6319618, Length=422, Percent_Identity=30.0947867298578, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=25.5924170616114, Blast_Score=130, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=412, Percent_Identity=28.6407766990291, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=26.9662921348315, Blast_Score=106, Evalue=9e-24, Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=38.6486486486486, Blast_Score=246, Evalue=2e-65, Organism=Drosophila melanogaster, GI24584399, Length=351, Percent_Identity=37.6068376068376, Blast_Score=241, Evalue=9e-64, Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=35.5013550135501, Blast_Score=222, Evalue=4e-58, Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=35.5013550135501, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=35.5013550135501, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=35.5013550135501, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=35.5013550135501, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=35.5013550135501, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=35.5013550135501, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI21356161, Length=357, Percent_Identity=36.4145658263305, Blast_Score=221, Evalue=7e-58, Organism=Drosophila melanogaster, GI28574962, Length=344, Percent_Identity=37.7906976744186, Blast_Score=220, Evalue=2e-57, Organism=Drosophila melanogaster, GI24584994, Length=381, Percent_Identity=35.1706036745407, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI21355075, Length=370, Percent_Identity=35.9459459459459, Blast_Score=211, Evalue=6e-55, Organism=Drosophila melanogaster, GI24662330, Length=358, Percent_Identity=35.4748603351955, Blast_Score=211, Evalue=7e-55, Organism=Drosophila melanogaster, GI24645031, Length=370, Percent_Identity=33.7837837837838, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=36.1111111111111, Blast_Score=209, Evalue=4e-54, Organism=Drosophila melanogaster, GI17977678, Length=363, Percent_Identity=33.8842975206612, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24642151, Length=344, Percent_Identity=36.9186046511628, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI28575014, Length=387, Percent_Identity=30.749354005168, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24642822, Length=416, Percent_Identity=32.9326923076923, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24585582, Length=419, Percent_Identity=29.8329355608592, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24583281, Length=376, Percent_Identity=30.0531914893617, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24583279, Length=376, Percent_Identity=30.0531914893617, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581954, Length=358, Percent_Identity=32.6815642458101, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI24581952, Length=358, Percent_Identity=32.6815642458101, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI24581956, Length=358, Percent_Identity=32.6815642458101, Blast_Score=178, Evalue=6e-45, Organism=Drosophila melanogaster, GI19920478, Length=350, Percent_Identity=32, Blast_Score=178, Evalue=8e-45, Organism=Drosophila melanogaster, GI24582080, Length=379, Percent_Identity=31.9261213720317, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24582078, Length=379, Percent_Identity=31.9261213720317, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI17136248, Length=379, Percent_Identity=31.9261213720317, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24582075, Length=379, Percent_Identity=31.9261213720317, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI28571808, Length=344, Percent_Identity=33.1395348837209, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI28571809, Length=344, Percent_Identity=33.1395348837209, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=30.2949061662198, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI281365720, Length=305, Percent_Identity=35.7377049180328, Blast_Score=171, Evalue=9e-43, Organism=Drosophila melanogaster, GI17136814, Length=404, Percent_Identity=31.1881188118812, Blast_Score=170, Evalue=2e-42, Organism=Drosophila melanogaster, GI20130173, Length=431, Percent_Identity=29.9303944315545, Blast_Score=165, Evalue=6e-41, Organism=Drosophila melanogaster, GI24643725, Length=390, Percent_Identity=28.974358974359, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=29.2479108635098, Blast_Score=159, Evalue=3e-39, Organism=Drosophila melanogaster, GI21355559, Length=400, Percent_Identity=32, Blast_Score=156, Evalue=2e-38, Organism=Drosophila melanogaster, GI18859659, Length=449, Percent_Identity=29.1759465478842, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI28571338, Length=449, Percent_Identity=29.1759465478842, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=30.8868501529052, Blast_Score=129, Evalue=3e-30, Organism=Drosophila melanogaster, GI17136666, Length=414, Percent_Identity=26.5700483091787, Blast_Score=106, Evalue=4e-23, Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=23.7960339943343, Blast_Score=99, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 49294; Mature: 49163
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTHLSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKT CCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH MAFLVATFNHLLSTPVPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKHSHLKVGIVYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCCEEEEEEEC GESYDVQRKTLDQGVDILIGTTGRIIDYVRQGIINLGGIQAVVLDEADRMFDLGFIKDIR CCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH FLFRRMPSADQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILE CHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH QFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFA HHCCCCEEEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEE CEEYALNLPAIETYINHSIPVSNYDRDALLEDIPPPVKIHRRHPAGARNLRERSGAGRPQ HHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCCCC GAHRSGGRPPRHDRTRRQP CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SQTHLSNQKFADLPLHPEVKQALAENGFEFCTPIQALSLPVLLQSKDIAGQAQTGTGKT CCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH MAFLVATFNHLLSTPVPENRQLNQPRAIIMAPTRELAIQIAKDAILLAKHSHLKVGIVYG HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHEEEEEECCCEEEEEEEC GESYDVQRKTLDQGVDILIGTTGRIIDYVRQGIINLGGIQAVVLDEADRMFDLGFIKDIR CCCCCHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH FLFRRMPSADQRLNMLFSATLSMKVQELAYDHMNEPVKVEIAPEEKTSKNIKEEIFYPSQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCC EDKMRLLLTLIEEDWPEKAIVFSNTKHSCENLWSWLEGDGHRVGLLTGDVPQKKRIRILE CHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH QFTQGQLDILVATDVAARGLHISDVSHVYNYDLPDDCEDYVHRIGRTGRAGNKGVSVSFA HHCCCCEEEEEEECHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEE CEEYALNLPAIETYINHSIPVSNYDRDALLEDIPPPVKIHRRHPAGARNLRERSGAGRPQ HHHHHCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHCCCCCCC GAHRSGGRPPRHDRTRRQP CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]