| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is katG1 [H]
Identifier: 117918763
GI number: 117918763
Start: 342661
End: 344847
Strand: Direct
Name: katG1 [H]
Synonym: Shewana3_0306
Alternate gene names: 117918763
Gene position: 342661-344847 (Clockwise)
Preceding gene: 117918762
Following gene: 117918768
Centisome position: 6.89
GC content: 53.18
Gene sequence:
>2187_bases ATGGACAAGACGCAAAGCTCCCAAGGTAAATGCCCCGTGATGCATGGGGCGAATTCAGCGGTCGCCAGCAACAATATGGA CTGGTGGCCTAAGGCGCTTAATCTCGATATTTTGCACCAGCACGATAAGAAGACGGATCCTATGGATCCTAAGTTTAACT ATCGCGATGCCTTCAACAGCTTAGATCTCGCCGCGGTGAAGCGCGACCTCAATGCCTTAATGACCGACAGCCAAGATTGG TGGCCCGCCGACTGGGGTCACTATGGTGGCCTGATGATCCGTATGGCATGGCACTCGGCCGGGACCTATAGAGTTGCCGA TGGACGTGGTGGCGCGGGAACGGGCAATCAACGCTTTGCGCCACTCAATAGCTGGCCTGATAACGCCAACCTCGACAAAG CCCGTCGCCTGCTCTGGCCGATCAAGAAAAAATACGGCAACAAACTCTCATGGGCGGATTTAATGATCCTCGCGGGCAAT GTGGCCTACGAGTCTATGGGTTTAAAAACCTATGGATTCGCCGGTGGCCGAGAGGATATCTGGCACCCAGAGAAGGACAT TTATTGGGGCTCTGAAAAACAATGGTTAGCGCCGACGGAAAATCCCAATAGTCGTTACTCTGGCGAGCGCGACCTTGAAA ACCCCTTGGCCGCCGTGATGATGGGGTTGATTTATGTGAATCCAGAAGGGGTTGATGGCAAACCCGATCCCCTGCGTACC GCCCAAGATGTGCGTGTCACCTTTGCACGAATGGCGATGAATGATGAAGAAACCGTGGCCTTAACCGCCGGCGGCCATAC TGTCGGTAAGTGCCATGGTAATGGTAAGGCGCAGGATCTTGGCCCCGAGCCAGAGGGCGAAGAACTTGAGGCCCAAGGTT TGGGTTGGCTCAACAAAAAAGGCCCGGGCACAGGCGCGAATGCCGTGACCAGTGGCCTCGAAGGTGCTTGGACAACTCAT CCCACCCAGTGGGATAACGGTTATTTTCACCTACTGTTAAATTACGACTGGGAATTGAAAAAAAGCCCAGCGGGCGCCTC ACAGTGGGAACCCATTAATATCAAAGAGGAAGATAAAGTTGTTTCTGTGGGCGATCCGAATCGCAAGTTTAATCCCATCA TGACGGATGCGGATATGGCGATGAAGATGGATCCTGAGTATCGCAAAATCTCCGAAAAGTTTTATCAGGACCCTGCCTAT TTCTCCGAGGTATTTGCCCGTGCTTGGTTTAAGTTAACCCACCGCGATCTCGGGCCTAAGAGTCGCTACTTGGGGCCAGA AGTGCCGAATGAGGATTTGCTTTGGCAAGACCCGATCCCAAGCGTCGATTACCGTTTAGATGCCAGTGAGATTGTTGAGC TGAAGGCGAAATTATTAGCCTCGGGGCTCAGCGTATCCGATTTAGTGGCAACGGCGTGGGACAGTGCCCGCACCTTCCGT GGCTCGGATTTCCGTGGTGGCGCCAATGGCGCGCGGATCCGCTTAGCACCGCAAAAGGATTGGCAGGCCAACGAACCCGA GCGGCTGCAAAAAGTGCTTAAAGTATTGATTGAGCTGCAGGCAAGCCTAAGCAAAAAAGTCAGCATTGCCGACTTAATCG TACTGGGCGGCGCCGCAGCGATTGAAAAGGCCGCCCACGCTGCGGGAGTCAAAATCACAGTGCCCTTTATCCCCGGTCGT GGCGATGCGACGCAGGAAATGACAGATGTGGAATCCTTTGCCGTACTCGAGCCCTTGCACGATGCGTATCGTAACTGGCA AAAAAAGGATTATGTGGTTCAGCCCGAGGAGATGATGCTCGATCGCACTCAATTGATGGGGTTAACCGCCCATGAGATGA CGGTGCTGATTGGGGGAATGCGGGTGTTAGGCACTAACTATGGCGGCACGCGTCACGGTGTGTTTACCGACAAAGTGGGT GTGTTAACCAATGATTTCTTTGTGAATCTCACCGACATGGCCTACAACTGGAAGCCTGCGGGCAGCAATCTTTATGAGAT AGTCGAGCGTAAAACTGGCGCAGTGAAGTGGACCGCAACCCGCGTCGATCTGGTGTTTGGCTCTAACTCGATTTTGCGCT CCTATGCCGAGGTATATGCGCAGGATGATGCCAAAGAGAAGTTTGTGCATGACTTTGTGGCCGCTTGGACTAAGGTGATG AATGCCGATAGGTTCGACCTTGCCTAA
Upstream 100 bases:
>100_bases TTGGCAAACTGTGAAGGCTCTCGTTTCGACCGTAGTGTGTCTAGCAAGAGTTTTAGGGCGCGCTACTCCCGTTAGTGCAA GCTAAGTAAAGGAATATTCA
Downstream 100 bases:
>100_bases TCATTAGCACTTAAACTTAGCGTGTACATAAAAGGTGCAGCTTGGGCTGCACCTTTTTTATATCTATTTATCAATAAATC AGAGAATTAATGACCCACGC
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP 1; Peroxidase/catalase 1 [H]
Number of amino acids: Translated: 728; Mature: 728
Protein sequence:
>728_residues MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYRDAFNSLDLAAVKRDLNALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGN VAYESMGLKTYGFAGGREDIWHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEELEAQGLGWLNKKGPGTGANAVTSGLEGAWTTH PTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKVVSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVELKAKLLASGLSVSDLVATAWDSARTFR GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLIELQASLSKKVSIADLIVLGGAAAIEKAAHAAGVKITVPFIPGR GDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMMLDRTQLMGLTAHEMTVLIGGMRVLGTNYGGTRHGVFTDKVG VLTNDFFVNLTDMAYNWKPAGSNLYEIVERKTGAVKWTATRVDLVFGSNSILRSYAEVYAQDDAKEKFVHDFVAAWTKVM NADRFDLA
Sequences:
>Translated_728_residues MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYRDAFNSLDLAAVKRDLNALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGN VAYESMGLKTYGFAGGREDIWHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEELEAQGLGWLNKKGPGTGANAVTSGLEGAWTTH PTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKVVSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVELKAKLLASGLSVSDLVATAWDSARTFR GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLIELQASLSKKVSIADLIVLGGAAAIEKAAHAAGVKITVPFIPGR GDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMMLDRTQLMGLTAHEMTVLIGGMRVLGTNYGGTRHGVFTDKVG VLTNDFFVNLTDMAYNWKPAGSNLYEIVERKTGAVKWTATRVDLVFGSNSILRSYAEVYAQDDAKEKFVHDFVAAWTKVM NADRFDLA >Mature_728_residues MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYRDAFNSLDLAAVKRDLNALMTDSQDW WPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGN VAYESMGLKTYGFAGGREDIWHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEELEAQGLGWLNKKGPGTGANAVTSGLEGAWTTH PTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKVVSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAY FSEVFARAWFKLTHRDLGPKSRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVELKAKLLASGLSVSDLVATAWDSARTFR GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLIELQASLSKKVSIADLIVLGGAAAIEKAAHAAGVKITVPFIPGR GDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMMLDRTQLMGLTAHEMTVLIGGMRVLGTNYGGTRHGVFTDKVG VLTNDFFVNLTDMAYNWKPAGSNLYEIVERKTGAVKWTATRVDLVFGSNSILRSYAEVYAQDDAKEKFVHDFVAAWTKVM NADRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=727, Percent_Identity=55.9834938101788, Blast_Score=809, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 81113; Mature: 81113
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4 ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYRDAFNS CCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCC LDLAAVKRDLNALMTDSQDWWPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC PLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGNVAYESMGLKTYGFAGGREDI CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCEEECCCCCCCCC WHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT CCCCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCC AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEELEAQGLGWLNKK HHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCC GPGTGANAVTSGLEGAWTTHPTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKV CCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE VSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAYFSEVFARAWFKLTHRDLGPK EECCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC SRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVELKAKLLASGLSVSDLVATAWDSARTFR CCCCCCCCCCCCCEECCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLIELQASLSKKVSIADLIVLGGAAA CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCHHH IEKAAHAAGVKITVPFIPGRGDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMML HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH DRTQLMGLTAHEMTVLIGGMRVLGTNYGGTRHGVFTDKVGVLTNDFFVNLTDMAYNWKPA HHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCEECCCCEEECCEEEEEECCEEECCCC GSNLYEIVERKTGAVKWTATRVDLVFGSNSILRSYAEVYAQDDAKEKFVHDFVAAWTKVM CCHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NADRFDLA CCCCCCCC >Mature Secondary Structure MDKTQSSQGKCPVMHGANSAVASNNMDWWPKALNLDILHQHDKKTDPMDPKFNYRDAFNS CCCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCC LDLAAVKRDLNALMTDSQDWWPADWGHYGGLMIRMAWHSAGTYRVADGRGGAGTGNQRFA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCC PLNSWPDNANLDKARRLLWPIKKKYGNKLSWADLMILAGNVAYESMGLKTYGFAGGREDI CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCEEECCCCCCCCC WHPEKDIYWGSEKQWLAPTENPNSRYSGERDLENPLAAVMMGLIYVNPEGVDGKPDPLRT CCCCCCCEECCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCCCCCCCCCC AQDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGKAQDLGPEPEGEELEAQGLGWLNKK HHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHCCCCCCCCC GPGTGANAVTSGLEGAWTTHPTQWDNGYFHLLLNYDWELKKSPAGASQWEPINIKEEDKV CCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCCCCCCCCCCE VSVGDPNRKFNPIMTDADMAMKMDPEYRKISEKFYQDPAYFSEVFARAWFKLTHRDLGPK EECCCCCCCCCCCCCCCCHHEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC SRYLGPEVPNEDLLWQDPIPSVDYRLDASEIVELKAKLLASGLSVSDLVATAWDSARTFR CCCCCCCCCCCCCEECCCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC GSDFRGGANGARIRLAPQKDWQANEPERLQKVLKVLIELQASLSKKVSIADLIVLGGAAA CCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCHHH IEKAAHAAGVKITVPFIPGRGDATQEMTDVESFAVLEPLHDAYRNWQKKDYVVQPEEMML HHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHH DRTQLMGLTAHEMTVLIGGMRVLGTNYGGTRHGVFTDKVGVLTNDFFVNLTDMAYNWKPA HHHHHHCCCHHHHHHHHCCEEEEECCCCCCCCCCEECCCCEEECCEEEEEECCEEECCCC GSNLYEIVERKTGAVKWTATRVDLVFGSNSILRSYAEVYAQDDAKEKFVHDFVAAWTKVM CCHHHHHHHHCCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH NADRFDLA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]