Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is yihV [C]
Identifier: 117918725
GI number: 117918725
Start: 301666
End: 302505
Strand: Direct
Name: yihV [C]
Synonym: Shewana3_0268
Alternate gene names: 117918725
Gene position: 301666-302505 (Clockwise)
Preceding gene: 117918724
Following gene: 117918726
Centisome position: 6.07
GC content: 55.24
Gene sequence:
>840_bases ATGGCAAATATTTTGCTGGTGGCCAATCTTAACTGTGACCGGGTGTTGATCCTTGATAAGCCGCTGAAAACAGGCGGTCG CTTTCATTATCAAGATGGCGGACAAAGGCTCGGCGGTGGTGGCGCCAATACTGGGCTTGGACTGGTATGGGCGGGCCATA GGGTTGCCCTCGTGAGCCAAGTCGGGCGGGATGAAATGGGCGACTGGGTTATCGCTGAGGCGAGTACTCAAGGGCTAGAT TGTCGTTTAGTGCAGCGCCGCGCGGGAAATACCTGTGAAATGTTGCTGGTGATGACGCCCGATGGTGAGCGCACCATCAT TCGTCCGCAGCGGCCTATTTTTGAGTTATCCGTACCGCCTAAATGGCAACACTGGGATGCGCTGTATTTTAATACCTCGG CTGAGGGCACGGTTAGTTGGGCGAAAACCGCACTGGATCACTGCCTTGTGATCGCGCAGCTAGCGAAGGATGACAGACCT CGTCCTTGCCACGTGTTGCTGGCTTCCGTGAGTGATATGCAAGGCCGCTGTGATGTCGCTTCTTGGGATTATGGCGTGAG CATTGGCGGTGAATCACTACGCTATTTTGTCGTCACCGACGGTGTGCGCGGCGCTAAGGTGTACACCCGAGATGATGTGC AGCATGTCCCGGCTGTGCCTGCTGAGGTTGTCGATACCACAGGGGCTGGTGATGCCTATGCCGCAGGGCTTATCCATGGA TTATGCGCCGGAAAAACCATTACCCAAGCCATGGCCGAAGGTGCGACTTGGGCGGCATTTGCCGTGGCTACCGACAGTTC TATCCCTGGCGATGCATTGAAGCAGTATTTAGAAGCATAA
Upstream 100 bases:
>100_bases CGATTGTGTCACCTGAGGTTTTGGTCTAGATTGAGGGCTCTTTTAACCGAGTCTTCGCCGAGAGTTCGCGCGGTCCGTTT TTTCATTATGGAGTCCTGTC
Downstream 100 bases:
>100_bases GTTGGGAGATAAATAGCAGGGCATAAAAGGGAGTCATCTTTCTGTCATCTGGGCTTGATAGAGTGTGCTCAGTGACGAAT AGCTCTTGTCCCTTAACGTT
Product: site-specific DNA-methyltransferase (adenine-specific)
Products: NA
Alternate protein names: Carbohydrate Kinase; Carbohydrate Kinase PfkB Family; Site-Specific DNA-Methyltransferase; PfkB Family Carbohydrate Kinase; PfkB Domain Protein; Carbohydrate Kinase PfkB
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MANILLVANLNCDRVLILDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDEMGDWVIAEASTQGLD CRLVQRRAGNTCEMLLVMTPDGERTIIRPQRPIFELSVPPKWQHWDALYFNTSAEGTVSWAKTALDHCLVIAQLAKDDRP RPCHVLLASVSDMQGRCDVASWDYGVSIGGESLRYFVVTDGVRGAKVYTRDDVQHVPAVPAEVVDTTGAGDAYAAGLIHG LCAGKTITQAMAEGATWAAFAVATDSSIPGDALKQYLEA
Sequences:
>Translated_279_residues MANILLVANLNCDRVLILDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDEMGDWVIAEASTQGLD CRLVQRRAGNTCEMLLVMTPDGERTIIRPQRPIFELSVPPKWQHWDALYFNTSAEGTVSWAKTALDHCLVIAQLAKDDRP RPCHVLLASVSDMQGRCDVASWDYGVSIGGESLRYFVVTDGVRGAKVYTRDDVQHVPAVPAEVVDTTGAGDAYAAGLIHG LCAGKTITQAMAEGATWAAFAVATDSSIPGDALKQYLEA >Mature_278_residues ANILLVANLNCDRVLILDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQVGRDEMGDWVIAEASTQGLDC RLVQRRAGNTCEMLLVMTPDGERTIIRPQRPIFELSVPPKWQHWDALYFNTSAEGTVSWAKTALDHCLVIAQLAKDDRPR PCHVLLASVSDMQGRCDVASWDYGVSIGGESLRYFVVTDGVRGAKVYTRDDVQHVPAVPAEVVDTTGAGDAYAAGLIHGL CAGKTITQAMAEGATWAAFAVATDSSIPGDALKQYLEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29933; Mature: 29802
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANILLVANLNCDRVLILDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQ CCEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEHHH VGRDEMGDWVIAEASTQGLDCRLVQRRAGNTCEMLLVMTPDGERTIIRPQRPIFELSVPP HCCCCCCCEEEEECCCCCCCEEEEHHHCCCCEEEEEEECCCCCEEEECCCCCEEEECCCC KWQHWDALYFNTSAEGTVSWAKTALDHCLVIAQLAKDDRPRPCHVLLASVSDMQGRCDVA CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCC SWDYGVSIGGESLRYFVVTDGVRGAKVYTRDDVQHVPAVPAEVVDTTGAGDAYAAGLIHG CCCCCEEECCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH LCAGKTITQAMAEGATWAAFAVATDSSIPGDALKQYLEA HHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure ANILLVANLNCDRVLILDKPLKTGGRFHYQDGGQRLGGGGANTGLGLVWAGHRVALVSQ CEEEEEEECCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCEEEEHHH VGRDEMGDWVIAEASTQGLDCRLVQRRAGNTCEMLLVMTPDGERTIIRPQRPIFELSVPP HCCCCCCCEEEEECCCCCCCEEEEHHHCCCCEEEEEEECCCCCEEEECCCCCEEEECCCC KWQHWDALYFNTSAEGTVSWAKTALDHCLVIAQLAKDDRPRPCHVLLASVSDMQGRCDVA CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHCCCCCCCCC SWDYGVSIGGESLRYFVVTDGVRGAKVYTRDDVQHVPAVPAEVVDTTGAGDAYAAGLIHG CCCCCEEECCCCEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHHH LCAGKTITQAMAEGATWAAFAVATDSSIPGDALKQYLEA HHCCHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA