Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is cysQ [H]
Identifier: 117918628
GI number: 117918628
Start: 203124
End: 203936
Strand: Direct
Name: cysQ [H]
Synonym: Shewana3_0170
Alternate gene names: 117918628
Gene position: 203124-203936 (Clockwise)
Preceding gene: 117918627
Following gene: 117918629
Centisome position: 4.09
GC content: 52.15
Gene sequence:
>813_bases ATGAAGCCAGAAGAGTTAATCGACGAGGTGATTGCGATAGCAACGGATGCGGGTCGCACTATTCGTGAGATTTACCTCAA GGGTAATTTTGAACGAGAAACCAAGTCTGATAATACCCCTGTCACCTCGGCGGACCTAGCGGCGAATCAGCTGATTTGTG AGCGCTTAGCCGCATTGACACCCGATATTCCTATCCTGTCCGAAGAGGCTGCCGATATTCCCCTAAGCGTGCGCGAAGGC TGGAAACGTTATTGGTTAGTCGATCCTCTCGATGGCACGGGGGAGTTTATTGCGGGCAGTGGTGACTTTTCGGTGATCAT CGCGCTGGTGGAGCACAATCGTCCGGTAATGGGTGTTGTGTATGTGCCGATGACGCAGGTGTGTTATTACGCCATTGCGG GCTTAGGCGCCTATAAACGCACCGATAAGCAGGAAGTGCGTATCAGTAGTCGGCAAATTCAGCATCGTGAGCAAGTTTCT CTTAGGTTAGCTGTGAGTCGTCGTCAGGATCCCCAATCCGTGTTGACCCTGTTCAATCAGCCTAAGCATTGTGAGTTGGT GGTCATGGGCGGTGCGGCCCTGAAGAGTTGTCTGGTTGCCGAAGGGCGCGCCGATTGCTATGTGCGAGTCGGGCCAACGG GGGAGTGGGACACCGGTGCCGCGCAGATCATTATTGAGGAAGCGGGTGGCCAGCTCATGGATACCGAGCTGCAACCTTTA ACCTACAACGAGCGTGAGACGCTTGAAAATCCTAACTTTATTGTTGTTGGTGCGCCCAATTTAGAGTGGGATAAAATTTT AATTGGTGAATAG
Upstream 100 bases:
>100_bases TTAGCGCAGAAACACCTACAACTTAAATAATCTTTTTCGTTAAAGCGTTCAGCAACTGAGTGCTTGTAAATCATTCGCGA AGTTTGCGATTGGAGTGGTT
Downstream 100 bases:
>100_bases TTTTACATGCAGTCGATTCGTCCAGTATTAAAGTCAGAGTTAGCCGATGTTTTTCAACTCGAACAGGCTATCTTTGGCGA TCATTGTTATCCCGACTTTT
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKPEELIDEVIAIATDAGRTIREIYLKGNFERETKSDNTPVTSADLAANQLICERLAALTPDIPILSEEAADIPLSVREG WKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVVYVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIQHREQVS LRLAVSRRQDPQSVLTLFNQPKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIIEEAGGQLMDTELQPL TYNERETLENPNFIVVGAPNLEWDKILIGE
Sequences:
>Translated_270_residues MKPEELIDEVIAIATDAGRTIREIYLKGNFERETKSDNTPVTSADLAANQLICERLAALTPDIPILSEEAADIPLSVREG WKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVVYVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIQHREQVS LRLAVSRRQDPQSVLTLFNQPKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIIEEAGGQLMDTELQPL TYNERETLENPNFIVVGAPNLEWDKILIGE >Mature_270_residues MKPEELIDEVIAIATDAGRTIREIYLKGNFERETKSDNTPVTSADLAANQLICERLAALTPDIPILSEEAADIPLSVREG WKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVVYVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIQHREQVS LRLAVSRRQDPQSVLTLFNQPKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIIEEAGGQLMDTELQPL TYNERETLENPNFIVVGAPNLEWDKILIGE
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=264, Percent_Identity=28.4090909090909, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI5031789, Length=264, Percent_Identity=28.4090909090909, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI7657236, Length=243, Percent_Identity=28.8065843621399, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1790659, Length=252, Percent_Identity=41.2698412698413, Blast_Score=173, Evalue=9e-45, Organism=Escherichia coli, GI1788882, Length=210, Percent_Identity=29.5238095238095, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193202572, Length=250, Percent_Identity=27.6, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI193202570, Length=252, Percent_Identity=26.5873015873016, Blast_Score=80, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6320493, Length=204, Percent_Identity=29.9019607843137, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI24664922, Length=265, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24664926, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357329, Length=243, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24664918, Length=236, Percent_Identity=26.271186440678, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29869; Mature: 29869
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEELIDEVIAIATDAGRTIREIYLKGNFERETKSDNTPVTSADLAANQLICERLAALT CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC PDIPILSEEAADIPLSVREGWKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVV CCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEE YVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIQHREQVSLRLAVSRRQDPQSVLTLFNQ ECCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCC PKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIIEEAGGQLMDTELQPL CCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCC TYNERETLENPNFIVVGAPNLEWDKILIGE CCCHHHHCCCCCEEEEECCCCCCCEEEECC >Mature Secondary Structure MKPEELIDEVIAIATDAGRTIREIYLKGNFERETKSDNTPVTSADLAANQLICERLAALT CCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC PDIPILSEEAADIPLSVREGWKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVV CCCCCCCCCCCCCCCHHHCCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEE YVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIQHREQVSLRLAVSRRQDPQSVLTLFNQ ECCHHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHCC PKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIIEEAGGQLMDTELQPL CCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCC TYNERETLENPNFIVVGAPNLEWDKILIGE CCCHHHHCCCCCEEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]