Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is exeI [H]
Identifier: 117918614
GI number: 117918614
Start: 180965
End: 181333
Strand: Direct
Name: exeI [H]
Synonym: Shewana3_0156
Alternate gene names: 117918614
Gene position: 180965-181333 (Clockwise)
Preceding gene: 117918613
Following gene: 117918615
Centisome position: 3.64
GC content: 47.7
Gene sequence:
>369_bases ATGAAATACGCTAAGGGTATGACCCTACTCGAAGTCATTGTGGCCTTGGCGGTATTTGCCATCGCCGCCGTCTCTATCAC CAAAAGCTTAGGTGAACAGATGGCGAATATGCCGATTCTGGAGTCACGCACTCTTGCCCAATGGGTGGCGGATAATCAAA TGGTCGACGCCAGACTCGATCCGCAATTTCCCGAATTAGGCAAAAAAGAAGGGCAGGTAGAACTCGCGGGTAAGGATTGG TACTGGCGTAAAGAAGTGGTGAAAACCACGGATGATAACTTTCGCATGATCCGCATTAGTGTCAGTGAAGATGAGCGTTA TCAGCGTATTGCAGCACAAGTGAGCAGTTATGTCCTTAAAACAAACTAA
Upstream 100 bases:
>100_bases AGCGCCTTCGAACTGAGCTTTATGACCAAGACCGACAAGGGGCCACTCGATGTATTAGTGGTGGGCGATGCCCTTGGCCG TTTAACCCTAGGGCGACCCG
Downstream 100 bases:
>100_bases GGCTCATAAGGGATTTACCCTGCTGGAAATGCTGATCGCGATTGCGATTTTTGCCATGTTAGGTTTAGCCGCCAATGCGG TACTTAGCACTGTGCTGACC
Product: general secretion pathway protein I
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLDPQFPELGKKEGQVELAGKDW YWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLKTN
Sequences:
>Translated_122_residues MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLDPQFPELGKKEGQVELAGKDW YWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLKTN >Mature_122_residues MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLDPQFPELGKKEGQVELAGKDW YWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLKTN
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010052 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR003413 [H]
Pfam domain/function: PF02501 GSPII_IJ; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 13856; Mature: 13856
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCC PQFPELGKKEGQVELAGKDWYWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLK CCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHC TN CC >Mature Secondary Structure MKYAKGMTLLEVIVALAVFAIAAVSITKSLGEQMANMPILESRTLAQWVADNQMVDARLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCC PQFPELGKKEGQVELAGKDWYWRKEVVKTTDDNFRMIRISVSEDERYQRIAAQVSSYVLK CCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHC TN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]