Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918601
Identifier: 117918601
GI number: 117918601
Start: 164796
End: 165149
Strand: Direct
Name: 117918601
Synonym: Shewana3_0143
Alternate gene names: NA
Gene position: 164796-165149 (Clockwise)
Preceding gene: 117918597
Following gene: 117918603
Centisome position: 3.31
GC content: 44.35
Gene sequence:
>354_bases ATGAACATCACCTCATTTTTCGGTCAGCCCGAGTCGTTACAGTGCTGGATAAGAAAGTGCATCGAACAACCGGGATTAAG TTATTGGCTGGTTTATCAAGATCTTGATGAAGGTGAATCCCTACAGCTGACCACGTTATTGTTCCCGATAGTGGCTGATA GGGATCTATCAGATGCCGAAATTGATGCCTTTGAGGATGGCTTAGGCCACAGTGACTATGGTTATCTGCTAAATACGGAT CAAATCGAGGATGTGATTGATAATCTTAAGCAGCAAAAAGCGCAGCCCAGTGAACAGGAACTGCTTGAAGCGATCATCTT TTACTATGAGCGAGATGCGTTTATCAGCCTCTGA
Upstream 100 bases:
>100_bases TCTTACTTGTATGCATCTTGATAGTGGTGAATAGCCTCTATGACCATGCAACTCTTTGACTCACTCGGTTTTACTATGAC AACACCATTTCGAGGACATT
Downstream 100 bases:
>100_bases TGGGCTCTTTGCAGAGCGTCGCGACTTAAGTTGAGATAAGCGCCCCGGAGGAATCAACTCAGGGGCGCGGAGGGAGTAAG GTTTATTTTGCTAGCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MNITSFFGQPESLQCWIRKCIEQPGLSYWLVYQDLDEGESLQLTTLLFPIVADRDLSDAEIDAFEDGLGHSDYGYLLNTD QIEDVIDNLKQQKAQPSEQELLEAIIFYYERDAFISL
Sequences:
>Translated_117_residues MNITSFFGQPESLQCWIRKCIEQPGLSYWLVYQDLDEGESLQLTTLLFPIVADRDLSDAEIDAFEDGLGHSDYGYLLNTD QIEDVIDNLKQQKAQPSEQELLEAIIFYYERDAFISL >Mature_117_residues MNITSFFGQPESLQCWIRKCIEQPGLSYWLVYQDLDEGESLQLTTLLFPIVADRDLSDAEIDAFEDGLGHSDYGYLLNTD QIEDVIDNLKQQKAQPSEQELLEAIIFYYERDAFISL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13503; Mature: 13503
Theoretical pI: Translated: 3.67; Mature: 3.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITSFFGQPESLQCWIRKCIEQPGLSYWLVYQDLDEGESLQLTTLLFPIVADRDLSDAE CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCH IDAFEDGLGHSDYGYLLNTDQIEDVIDNLKQQKAQPSEQELLEAIIFYYERDAFISL HHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECC >Mature Secondary Structure MNITSFFGQPESLQCWIRKCIEQPGLSYWLVYQDLDEGESLQLTTLLFPIVADRDLSDAE CCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCH IDAFEDGLGHSDYGYLLNTDQIEDVIDNLKQQKAQPSEQELLEAIIFYYERDAFISL HHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA