Click here to switch to the map view.

The map label for this gene is 117918574

Identifier: 117918574

GI number: 117918574

Start: 132180

End: 132563

Strand: Direct

Name: 117918574

Synonym: Shewana3_0116

Alternate gene names: NA

Gene position: 132180-132563 (Clockwise)

Preceding gene: 117918571

Following gene: 117918575

Centisome position: 2.66

GC content: 50.0

Gene sequence:

>384_bases
ATGTTTTGTCGATACGGATGCTTGCTAGTCTTGTTGTGCAGTGGCGCGGCATTGGCGCAGGATGAGTCCCCTAAAGGCTG
TGCTGCAAAGCTAGCGGCAATTGAGACACAGCTTGTTGAGGCTAAAGCCGCGGGTAATCAAGCAAAAGCAGAGGGGTTAG
AGCAGGCGCGCCAAGCCGTGCTAACTCACTGTGACGATGACAAGCTTTACCAAGAGCGCTTAGCCAAGGTTGAAACCTTA
GAAGCTAAACTCGTCGAACGTCAAAATGAGCTGACAGATGCGATAGCTGTGGGTAAGTCTATGGATAAAATCAATAAAAA
ACGCCAAAAGGTGGCAGAGGCTCAAGCTGAACTGGATCAGGCGCAGGCCAAACTTGAGCAATAG

Upstream 100 bases:

>100_bases
AAGTCGATTTTACTTAAGCACAAATACAGCTTGTGGTTATAAGCTATGGCACTATCAAGCCTATCGCAGGATTAAATATT
GCCACCTAAAGGAGGAGCCT

Downstream 100 bases:

>100_bases
CTGCTAGGCCATTAGCTGCTGCGCTATGGATGCTGGACTCAATCTGGCATTTTCAACCGTGATGCGCTTTAAGCTCTTGG
CCTCGAATGCTAAAATCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MFCRYGCLLVLLCSGAALAQDESPKGCAAKLAAIETQLVEAKAAGNQAKAEGLEQARQAVLTHCDDDKLYQERLAKVETL
EAKLVERQNELTDAIAVGKSMDKINKKRQKVAEAQAELDQAQAKLEQ

Sequences:

>Translated_127_residues
MFCRYGCLLVLLCSGAALAQDESPKGCAAKLAAIETQLVEAKAAGNQAKAEGLEQARQAVLTHCDDDKLYQERLAKVETL
EAKLVERQNELTDAIAVGKSMDKINKKRQKVAEAQAELDQAQAKLEQ
>Mature_127_residues
MFCRYGCLLVLLCSGAALAQDESPKGCAAKLAAIETQLVEAKAAGNQAKAEGLEQARQAVLTHCDDDKLYQERLAKVETL
EAKLVERQNELTDAIAVGKSMDKINKKRQKVAEAQAELDQAQAKLEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13802; Mature: 13802

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCRYGCLLVLLCSGAALAQDESPKGCAAKLAAIETQLVEAKAAGNQAKAEGLEQARQAV
CCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LTHCDDDKLYQERLAKVETLEAKLVERQNELTDAIAVGKSMDKINKKRQKVAEAQAELDQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQAKLEQ
HHHHHCC
>Mature Secondary Structure
MFCRYGCLLVLLCSGAALAQDESPKGCAAKLAAIETQLVEAKAAGNQAKAEGLEQARQAV
CCCHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
LTHCDDDKLYQERLAKVETLEAKLVERQNELTDAIAVGKSMDKINKKRQKVAEAQAELDQ
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQAKLEQ
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA