Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918549
Identifier: 117918549
GI number: 117918549
Start: 101578
End: 102012
Strand: Direct
Name: 117918549
Synonym: Shewana3_0090
Alternate gene names: NA
Gene position: 101578-102012 (Clockwise)
Preceding gene: 117918547
Following gene: 117918550
Centisome position: 2.04
GC content: 48.51
Gene sequence:
>435_bases ATGAGACTGTTTATGAAATATTTACCCGCATTTGGCTTAGGTATTCTGTTGGCGGTATTAAGCTTTGTGAGTTTCGCGCT GGTTGCTACGGCGGGCTACATGTACGCCTTGCTCGGAAGTGTCGATAACCTCAGCCACACTAGCCCAGTTTATCTGGGGT TAGGTGCCCATGATGCGGGCTTATTATTGCTGCTCTCTGGGCTGATGTTATTTAGTTATCAGCGGCTTTTTCCTCGATTG CCATTCGATTGGTATGCAGCGGTGGCGATGCAATTACCCTTAGGTTCCTTAGTGCTGTGGGCGGATGGGGTTTCCTTTAG TCTTACTGATTTTTATGGCTTAGCCAGAGCCTTAACCCTATTTAGCGCCACCTTTGGAGTGCTGATTATTTTTGGCTTAT TGCAGCGCCGTAGCCGCAGGCTTGCTCGGGCTTAA
Upstream 100 bases:
>100_bases GCTAAGGGAAATTTTGGCTGTTATTGTAGCTTTACTATCTTTCGACTGAATTTGTTCTCCTTTAGGGTTTTAGGAATGAG GTCGAGCGAGTTCTGCACTG
Downstream 100 bases:
>100_bases TCGGTCATTTGTTGGCCTTAAACTGGCCTTGCTGAAATAAAATCCGTAAAATCATTGGCCTAAATGGATTTGAGTCGTAA GAGTAGGAGCCAATGAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 144
Protein sequence:
>144_residues MRLFMKYLPAFGLGILLAVLSFVSFALVATAGYMYALLGSVDNLSHTSPVYLGLGAHDAGLLLLLSGLMLFSYQRLFPRL PFDWYAAVAMQLPLGSLVLWADGVSFSLTDFYGLARALTLFSATFGVLIIFGLLQRRSRRLARA
Sequences:
>Translated_144_residues MRLFMKYLPAFGLGILLAVLSFVSFALVATAGYMYALLGSVDNLSHTSPVYLGLGAHDAGLLLLLSGLMLFSYQRLFPRL PFDWYAAVAMQLPLGSLVLWADGVSFSLTDFYGLARALTLFSATFGVLIIFGLLQRRSRRLARA >Mature_144_residues MRLFMKYLPAFGLGILLAVLSFVSFALVATAGYMYALLGSVDNLSHTSPVYLGLGAHDAGLLLLLSGLMLFSYQRLFPRL PFDWYAAVAMQLPLGSLVLWADGVSFSLTDFYGLARALTLFSATFGVLIIFGLLQRRSRRLARA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15789; Mature: 15789
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLFMKYLPAFGLGILLAVLSFVSFALVATAGYMYALLGSVDNLSHTSPVYLGLGAHDAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHH LLLLLSGLMLFSYQRLFPRLPFDWYAAVAMQLPLGSLVLWADGVSFSLTDFYGLARALTL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHH FSATFGVLIIFGLLQRRSRRLARA HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLFMKYLPAFGLGILLAVLSFVSFALVATAGYMYALLGSVDNLSHTSPVYLGLGAHDAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHH LLLLLSGLMLFSYQRLFPRLPFDWYAAVAMQLPLGSLVLWADGVSFSLTDFYGLARALTL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHH FSATFGVLIIFGLLQRRSRRLARA HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA