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The map label for this gene is 117918547

Identifier: 117918547

GI number: 117918547

Start: 100076

End: 100471

Strand: Direct

Name: 117918547

Synonym: Shewana3_0088

Alternate gene names: NA

Gene position: 100076-100471 (Clockwise)

Preceding gene: 117918546

Following gene: 117918549

Centisome position: 2.01

GC content: 49.49

Gene sequence:

>396_bases
GTGATTAAACAAGTTGGCAATACTCATATCCAAGCAAAGCATCTCGCCAGTTGCCACTGTGGCGCCGTGGTGTTGGAGTT
ATCGCTGCCCAATGGCATTGAAAAGCCAAGGCGCTGTGATTGCTCTATCTGTCGGCGCAAGGGGGCTATTGTCGGCTCAG
TGCCGCTAGAGGGATTGAAGATTATCAAAGGCGAGACCGTATTAAAGTGCTACGAATTTAATACCAAAACGGCCAAACAT
TACTTCTGCTCCGTGTGCGGCATTTATACCCATCATCAAAGGCGCTCTAATCCCAATGAATATGGCTATAACCTTGGTTG
CCTCGAAGGCGTTAATCCCTATGAATTAGGCGATGTGCCGGTTTGCGATGGGGTGAATCACCCGGCGGACAGGTAG

Upstream 100 bases:

>100_bases
GTTGGGGCCAGTGATCAATGCCAAGGCGCAGCAAGTGCAAAACTGGCAAGCGCAAGTTGAACGGCATGGCAGGTTGGGGC
GTTAATCAAAAGGAGCTTAA

Downstream 100 bases:

>100_bases
ATTTGATTTGCCCGATAAACAAAAAGCGACCCTTGGGTCGCTTTTTGTGTGCAGTGCCGATGTTAGTCGATCACTAGCTC
ATCGAAACTGTTAATAGTGC

Product: glutathione-dependent formaldehyde-activating, GFA

Products: NA

Alternate protein names: Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein; Plasmid PRiA4b ORF-3 Family Protein; Inner Membrane Protein; Gfa-Like Protein; Glutathione-Dependent Formaldehyde-Activating Protein Gfa

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MIKQVGNTHIQAKHLASCHCGAVVLELSLPNGIEKPRRCDCSICRRKGAIVGSVPLEGLKIIKGETVLKCYEFNTKTAKH
YFCSVCGIYTHHQRRSNPNEYGYNLGCLEGVNPYELGDVPVCDGVNHPADR

Sequences:

>Translated_131_residues
MIKQVGNTHIQAKHLASCHCGAVVLELSLPNGIEKPRRCDCSICRRKGAIVGSVPLEGLKIIKGETVLKCYEFNTKTAKH
YFCSVCGIYTHHQRRSNPNEYGYNLGCLEGVNPYELGDVPVCDGVNHPADR
>Mature_131_residues
MIKQVGNTHIQAKHLASCHCGAVVLELSLPNGIEKPRRCDCSICRRKGAIVGSVPLEGLKIIKGETVLKCYEFNTKTAKH
YFCSVCGIYTHHQRRSNPNEYGYNLGCLEGVNPYELGDVPVCDGVNHPADR

Specific function: Unknown

COG id: COG3791

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI56118234, Length=97, Percent_Identity=38.1443298969072, Blast_Score=69, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI25149380, Length=100, Percent_Identity=36, Blast_Score=76, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI25149382, Length=92, Percent_Identity=38.0434782608696, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14455; Mature: 14455

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
7.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKQVGNTHIQAKHLASCHCGAVVLELSLPNGIEKPRRCDCSICRRKGAIVGSVPLEGLK
CCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEECCCCCCEE
IIKGETVLKCYEFNTKTAKHYFCSVCGIYTHHQRRSNPNEYGYNLGCLEGVNPYELGDVP
EECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
VCDGVNHPADR
CCCCCCCCCCC
>Mature Secondary Structure
MIKQVGNTHIQAKHLASCHCGAVVLELSLPNGIEKPRRCDCSICRRKGAIVGSVPLEGLK
CCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCEEECCCCCCEE
IIKGETVLKCYEFNTKTAKHYFCSVCGIYTHHQRRSNPNEYGYNLGCLEGVNPYELGDVP
EECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
VCDGVNHPADR
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA