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The map label for this gene is secB [H]

Identifier: 117918512

GI number: 117918512

Start: 62731

End: 63216

Strand: Direct

Name: secB [H]

Synonym: Shewana3_0053

Alternate gene names: 117918512

Gene position: 62731-63216 (Clockwise)

Preceding gene: 117918511

Following gene: 117918513

Centisome position: 1.26

GC content: 47.12

Gene sequence:

>486_bases
ATGGCTGAAGTAGCAAACAACGAACAACAAGCCCCACAATTCAACATCCAACGTGTTTACACTAAAGATGTTTCTTTCGA
AACACCTAACAGCCCAGCTGTATTCCAAAAAGAATGGAATCCAGAAGTTAAGTTAGATTTAGACACTCGCAGCGCTAAAT
TAGCCGACGACGTATACGAAGTGGTTCTGTCTTTGACTGTGACTGCACAAAACGCTGGCGAAACTGCATTCCTGTGTGAA
GTACAACAAGCGGGTATCTTCTCAATCGCAGGTCTGACTGAGCCACAACTGGCTCACTCATTAGGTGCATACTGCCCTAA
CATCCTATTCCCATACGCGCGTGAAGCTGTAGGTAGCTTAGTGGGTCGTGGTACTTTCCCACAACTGAACTTAGCACCAG
TAAACTTCGACGCTCTGTTCGCACAATACGTGCAACAACGTCAAGCCGCAGCAGCTGCACCAGCAGCCGAAGAAGCTAAC
GCTTAA

Upstream 100 bases:

>100_bases
TGAGATCTCATTCAGGCATCAAAGCATAAGCCCAGCTAAATAGACAAAAAAGCCAACCAGATAAGTGTTGGCATAACATT
GATAGGATAGGTAGGAAATT

Downstream 100 bases:

>100_bases
TTACATGAAAAACTCTGCCGATATCACTGTGTTAGGGGCGGGCTCTTATGGCACCGCCCTTGCCATCTCTCTAGCCAGCA
ATGGTCATAAGACCTTGTTG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVLSLTVTAQNAGETAFLCE
VQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSLVGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAAPAAEEAN
A

Sequences:

>Translated_161_residues
MAEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVLSLTVTAQNAGETAFLCE
VQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSLVGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAAPAAEEAN
A
>Mature_160_residues
AEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYEVVLSLTVTAQNAGETAFLCEV
QQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSLVGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAAPAAEEANA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=147, Percent_Identity=71.4285714285714, Blast_Score=222, Evalue=9e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 17421; Mature: 17289

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYE
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHH
VVLSLTVTAQNAGETAFLCEVQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSL
HHHHHHEEECCCCCEEEEEEHHHCCEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
VGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAAPAAEEANA
HCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AEVANNEQQAPQFNIQRVYTKDVSFETPNSPAVFQKEWNPEVKLDLDTRSAKLADDVYE
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCCEEEEECCCCHHHHHHHHH
VVLSLTVTAQNAGETAFLCEVQQAGIFSIAGLTEPQLAHSLGAYCPNILFPYAREAVGSL
HHHHHHEEECCCCCEEEEEEHHHCCEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHH
VGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAAPAAEEANA
HCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA