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The map label for this gene is yibN [H]

Identifier: 117918511

GI number: 117918511

Start: 61994

End: 62470

Strand: Direct

Name: yibN [H]

Synonym: Shewana3_0052

Alternate gene names: 117918511

Gene position: 61994-62470 (Clockwise)

Preceding gene: 117918506

Following gene: 117918512

Centisome position: 1.25

GC content: 41.51

Gene sequence:

>477_bases
GTGCCCTTATCGAATTTTTCGCCATTTATACGGGCTGTAACCATGCAAGAATATATCGAATTTTTTAAGGCTCACACTAT
GCTAAGTCTGGCTTGGGTGGGTTTGTTTGTAATGCTTGTGGTCAGTGTGATCAAATCGAGCTTCTCTAAAATCAAAAATG
TCACTCATCAAGAACTCACCACTATGGTGAACAGACAAGACGCTAAAGTCGTGGATGTGCGTTCAAATGACGAGTTCCGT
AAGGGCCATATTGTTGATGCAGTTAACGTTACGCTCGCGGATATCAAAAATAATCAGGTTTCAGCCCTTGAAAAGTTCAA
AGGCAGTCCCATTATACTGGTATGCAATGCTGGCATGACCTCGTCTCAAGCGGCTCAGCTTTTAAGTAAACAAGGTTTTG
AAAACCTGTATAACTTGAAAGGTGGTATGGGTGAATGGCAGGCAGCAAATATGCCTGTTTCAAAAAGCAAAAGATAA

Upstream 100 bases:

>100_bases
TTCTGTGAGCGCCAAGAGAAGCGAGATGGCGCAAGGGCTGAGCTGTGTTCTAGAACTGTGACTAAACTGCTGCAATCTGC
CAAGGCAATGGGTATACTCT

Downstream 100 bases:

>100_bases
GTTGTCGGCGGCAGTTATGCGCTGTGCTGCATAGTTAATTGATTGTGCAGCAGTTGCGTCATCATTGTTTGGCATACTAA
TCCTGTGGTCACTAAGGGCT

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPLSNFSPFIRAVTMQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVRSNDEFR
KGHIVDAVNVTLADIKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR

Sequences:

>Translated_158_residues
MPLSNFSPFIRAVTMQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVRSNDEFR
KGHIVDAVNVTLADIKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR
>Mature_157_residues
PLSNFSPFIRAVTMQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELTTMVNRQDAKVVDVRSNDEFRK
GHIVDAVNVTLADIKNNQVSALEKFKGSPIILVCNAGMTSSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=41.958041958042, Blast_Score=130, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 17586; Mature: 17454

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSNFSPFIRAVTMQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TMVNRQDAKVVDVRSNDEFRKGHIVDAVNVTLADIKNNQVSALEKFKGSPIILVCNAGMT
HHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCC
SSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PLSNFSPFIRAVTMQEYIEFFKAHTMLSLAWVGLFVMLVVSVIKSSFSKIKNVTHQELT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
TMVNRQDAKVVDVRSNDEFRKGHIVDAVNVTLADIKNNQVSALEKFKGSPIILVCNAGMT
HHHCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHCCCCEEEEECCCCC
SSQAAQLLSKQGFENLYNLKGGMGEWQAANMPVSKSKR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]