Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
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Accession | NC_008573 |
Length | 278,942 |
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The map label for this gene is 117676212
Identifier: 117676212
GI number: 117676212
Start: 155350
End: 156240
Strand: Direct
Name: 117676212
Synonym: Shewana3_4273
Alternate gene names: NA
Gene position: 155350-156240 (Clockwise)
Preceding gene: 117676211
Following gene: 117676213
Centisome position: 55.69
GC content: 41.64
Gene sequence:
>891_bases TTGAAGATATTTAGCCTATTAGTGGCAGCTTGTTTTAGTTCAGTCAGTATTGCCAATGCTGAAGAGATAACAGTTACAGA GTCAGCAACCGATTTATGGGGTGTGAGTTATTTAAGTGGTAAACCAGTGGGCCGCAAAATGTCACTCAACAATTTCAAGG CGGATCTAATTGACCGAGCGGCGAGAAAAGCAATTTACTCTAAATTAAACCCTACAGCACAACAGGGCGTATTGATCAGG TCATCATCTAATGACGAATCGGTATTGCATGAGGTCGTTACTGCAAGTTCTTATATGTATTCTGTAAATAGTGTTGAATT CGGCTATAACGTGTTGCCTGCAGGTATTGAGATTAAAGCAGATATAACCGTTAGCATTCGTCCTTATGACGAGTCCATGC TGTTAAAACAGTTGGAAACGGATGTTCATCTATCGTCGCAGAATAGGCGCCACTGGACACCGATTGATGGACGCTATTTG AAAGAAAAAGAAGATAGAATTTATGGCACTCCTAATAGTTTGTTTGTGATCACCGGCAATCATGAGAACACTATGCCCTC CGACTATCAGTTTGTGTCTACTGAAACCTTTTTGGATTATTGGGTCATACGATACAAAGTCATGCTCGCTGACGCTTACG GGCGCCGTGGGGTAAAGGGTTCCTTTTTAGGTACGGTAGATGATGTTAGCTCAAGGCCAGATAAGGTCTTTGATGCCGTA CTGTCACATAAGCCTCAACAACAGATTAAATATCCTGACCAACAGATGATTAAAAGGATGGATGGAGCATTAATCTTAGT TGGTAAAAAGGTCGTATCTGTCAACAATTTGAAAAATACGCAAGTACCCATAGGTATGAGCGGAACAATTCAGGCAATGC CGTCGAAGTAG
Upstream 100 bases:
>100_bases TTTTAAATTCGGCGGTTTTTACCGCCGTTTTTTTTGGGAAATTTGTTGTTTTTGAATAGTGATGTAGCATGGATGGAAAT GTAGTGGTAGGGGAAAAATT
Downstream 100 bases:
>100_bases GGATGGATTTTATATGCAAAAAATTAGTGCCGCGCTGCTAATAATTACTATGTTGTTAACTAATACAGATGTCATTGCGG GTGAGTTTGATTATCGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRAARKAIYSKLNPTAQQGVLIR SSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKADITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYL KEKEDRIYGTPNSLFVITGNHENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK
Sequences:
>Translated_296_residues MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRAARKAIYSKLNPTAQQGVLIR SSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKADITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYL KEKEDRIYGTPNSLFVITGNHENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK >Mature_296_residues MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRAARKAIYSKLNPTAQQGVLIR SSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKADITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYL KEKEDRIYGTPNSLFVITGNHENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33019; Mature: 33019
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRA CHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHEEHCCCCCCCCCEECCCCHHHHHHHHH ARKAIYSKLNPTAQQGVLIRSSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKA HHHHHHHHCCCCHHCCEEEECCCCHHHHHHHHHHHHHHEEEECCEECCCEEECCCEEEEE DITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYLKEKEDRIYGTPNSLFVITGN EEEEEEECCCHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEEECC HENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV CCCCCCCCEEEEEHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCCCHHHHCCCHHHHHHHH LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK HCCCCHHHHCCCHHHHHHHHCCEEEEEECEEEEECCCCCCCCCCCCCCCEEECCCC >Mature Secondary Structure MKIFSLLVAACFSSVSIANAEEITVTESATDLWGVSYLSGKPVGRKMSLNNFKADLIDRA CHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHEEHCCCCCCCCCEECCCCHHHHHHHHH ARKAIYSKLNPTAQQGVLIRSSSNDESVLHEVVTASSYMYSVNSVEFGYNVLPAGIEIKA HHHHHHHHCCCCHHCCEEEECCCCHHHHHHHHHHHHHHEEEECCEECCCEEECCCEEEEE DITVSIRPYDESMLLKQLETDVHLSSQNRRHWTPIDGRYLKEKEDRIYGTPNSLFVITGN EEEEEEECCCHHHHHHHHHHCCEECCCCCCCCCCCCCCHHHCCCCEEECCCCEEEEEECC HENTMPSDYQFVSTETFLDYWVIRYKVMLADAYGRRGVKGSFLGTVDDVSSRPDKVFDAV CCCCCCCCEEEEEHHHHHHHHHHHHHEEEEHHCCCCCCCCCCCCCHHHHCCCHHHHHHHH LSHKPQQQIKYPDQQMIKRMDGALILVGKKVVSVNNLKNTQVPIGMSGTIQAMPSK HCCCCHHHHCCCHHHHHHHHCCEEEEEECEEEEECCCCCCCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA