Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
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Accession | NC_008573 |
Length | 278,942 |
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The map label for this gene is 117676213
Identifier: 117676213
GI number: 117676213
Start: 156254
End: 156799
Strand: Direct
Name: 117676213
Synonym: Shewana3_4274
Alternate gene names: NA
Gene position: 156254-156799 (Clockwise)
Preceding gene: 117676212
Following gene: 117676216
Centisome position: 56.02
GC content: 40.66
Gene sequence:
>546_bases ATGCAAAAAATTAGTGCCGCGCTGCTAATAATTACTATGTTGTTAACTAATACAGATGTCATTGCGGGTGAGTTTGATTA TCGTGGTAATGGTGTGTCCAGGTTAATTGTTCATGGATTCGACGACGCCGATTCGCTTGCGCACACAGGAAGTATCAAAT CGATTCAATATGCGCTTTACGATGCTTTGATGCAGTCAGGCCGCAAGATTGAAAAGCCTTGGGAAGTTGTGATGGTTTTG AATTTGTCCCCGTATGAAGTTACCGGGAGTGATTTAGCCTTTGAACAAGGAGTGATAGAAGGCCAGTCGGAGCCGATATT TAGAATTGTTGCCAGCAAAACAATAACAGTGAGAGGTGATGTGATTGATCGTGCTTATAAAAATGTTTTGAGGTTGGAGC AAAATCAGGAGTTTCAAAAGGCTTTTGACCAGTATTCTAAAGCGATGAATCATAAAAATGCGGGAGAGATGTCAAGGATC TTTATGAGTTTTGAGGCGCTTGATAAGCTGGGAATTTATCTTGAACACACGATTTCAAGTTATTGA
Upstream 100 bases:
>100_bases AAAAAGGTCGTATCTGTCAACAATTTGAAAAATACGCAAGTACCCATAGGTATGAGCGGAACAATTCAGGCAATGCCGTC GAAGTAGGGATGGATTTTAT
Downstream 100 bases:
>100_bases TATACAATCGTTTTAAAAATGGCTTTTCGAAGATTTTTGAAATTAAGATATAAAAAAGCTGGGAATGTCCCAGCTTTTTT TAGGAAATTAACCTTGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MQKISAALLIITMLLTNTDVIAGEFDYRGNGVSRLIVHGFDDADSLAHTGSIKSIQYALYDALMQSGRKIEKPWEVVMVL NLSPYEVTGSDLAFEQGVIEGQSEPIFRIVASKTITVRGDVIDRAYKNVLRLEQNQEFQKAFDQYSKAMNHKNAGEMSRI FMSFEALDKLGIYLEHTISSY
Sequences:
>Translated_181_residues MQKISAALLIITMLLTNTDVIAGEFDYRGNGVSRLIVHGFDDADSLAHTGSIKSIQYALYDALMQSGRKIEKPWEVVMVL NLSPYEVTGSDLAFEQGVIEGQSEPIFRIVASKTITVRGDVIDRAYKNVLRLEQNQEFQKAFDQYSKAMNHKNAGEMSRI FMSFEALDKLGIYLEHTISSY >Mature_181_residues MQKISAALLIITMLLTNTDVIAGEFDYRGNGVSRLIVHGFDDADSLAHTGSIKSIQYALYDALMQSGRKIEKPWEVVMVL NLSPYEVTGSDLAFEQGVIEGQSEPIFRIVASKTITVRGDVIDRAYKNVLRLEQNQEFQKAFDQYSKAMNHKNAGEMSRI FMSFEALDKLGIYLEHTISSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20350; Mature: 20350
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKISAALLIITMLLTNTDVIAGEFDYRGNGVSRLIVHGFDDADSLAHTGSIKSIQYALY CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHH DALMQSGRKIEKPWEVVMVLNLSPYEVTGSDLAFEQGVIEGQSEPIFRIVASKTITVRGD HHHHHCCCCCCCCEEEEEEEECCCCEECCCCHHHHHCCCCCCCCCEEEEEECCEEEEEHH VIDRAYKNVLRLEQNQEFQKAFDQYSKAMNHKNAGEMSRIFMSFEALDKLGIYLEHTISS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC Y C >Mature Secondary Structure MQKISAALLIITMLLTNTDVIAGEFDYRGNGVSRLIVHGFDDADSLAHTGSIKSIQYALY CCHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEEECCCCHHHHHHCCCHHHHHHHHH DALMQSGRKIEKPWEVVMVLNLSPYEVTGSDLAFEQGVIEGQSEPIFRIVASKTITVRGD HHHHHCCCCCCCCEEEEEEEECCCCEECCCCHHHHHCCCCCCCCCEEEEEECCEEEEEHH VIDRAYKNVLRLEQNQEFQKAFDQYSKAMNHKNAGEMSRIFMSFEALDKLGIYLEHTISS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA