Definition Borrelia afzelii PKo plasmid lp28, complete sequence.
Accession NC_008568
Length 28,533

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The map label for this gene is 117621810

Identifier: 117621810

GI number: 117621810

Start: 10600

End: 10833

Strand: Reverse

Name: 117621810

Synonym: BAPKO_4510

Alternate gene names: NA

Gene position: 10833-10600 (Counterclockwise)

Preceding gene: 117621814

Following gene: 117621806

Centisome position: 37.97

GC content: 20.94

Gene sequence:

>234_bases
ATGCAATCATTTTTTTGGCTAACATCCATGTTAATCTTTGATTTAACGGTTTGTCCAATTTTACCTTTATTTAAAATTTT
TTTAATATTGATAACAAATAATTTTTTAATTAACTTTAATTTTGTTTATCTTTTTAAGACCTTTATGATCAGAAAAAAAC
ACACTTATTCTGTTATCAGGATTAGGAATATTCTTTTTGTTTTTTATATAGTTACTACAATATCTTTCTTTTGA

Upstream 100 bases:

>100_bases
TTAAACCGAGATTTATACTAATATTTTTTTATTTATACTTCTTTTATTGTTTAACTAAAAATCATGAATAGAATATTTCT
ATAAGAAATGCATTTTATTA

Downstream 100 bases:

>100_bases
ACTTTTATTTAAGAACGTTTTCTTAAATCTTGTTTCCCAAATTTCATTAAAGTCATTTATTTTATCGGTCTTTCCGTTCA
TCATCCATATTTTTTTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIRIRNILFVFYIVTTISFF

Sequences:

>Translated_77_residues
MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIRIRNILFVFYIVTTISFF
>Mature_77_residues
MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIRIRNILFVFYIVTTISFF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9419; Mature: 9419

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHHHHH
IRNILFVFYIVTTISFF
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHHHHH
IRNILFVFYIVTTISFF
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA