Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621810
Identifier: 117621810
GI number: 117621810
Start: 10600
End: 10833
Strand: Reverse
Name: 117621810
Synonym: BAPKO_4510
Alternate gene names: NA
Gene position: 10833-10600 (Counterclockwise)
Preceding gene: 117621814
Following gene: 117621806
Centisome position: 37.97
GC content: 20.94
Gene sequence:
>234_bases ATGCAATCATTTTTTTGGCTAACATCCATGTTAATCTTTGATTTAACGGTTTGTCCAATTTTACCTTTATTTAAAATTTT TTTAATATTGATAACAAATAATTTTTTAATTAACTTTAATTTTGTTTATCTTTTTAAGACCTTTATGATCAGAAAAAAAC ACACTTATTCTGTTATCAGGATTAGGAATATTCTTTTTGTTTTTTATATAGTTACTACAATATCTTTCTTTTGA
Upstream 100 bases:
>100_bases TTAAACCGAGATTTATACTAATATTTTTTTATTTATACTTCTTTTATTGTTTAACTAAAAATCATGAATAGAATATTTCT ATAAGAAATGCATTTTATTA
Downstream 100 bases:
>100_bases ACTTTTATTTAAGAACGTTTTCTTAAATCTTGTTTCCCAAATTTCATTAAAGTCATTTATTTTATCGGTCTTTCCGTTCA TCATCCATATTTTTTTACTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIRIRNILFVFYIVTTISFF
Sequences:
>Translated_77_residues MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIRIRNILFVFYIVTTISFF >Mature_77_residues MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIRIRNILFVFYIVTTISFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9419; Mature: 9419
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHHHHH IRNILFVFYIVTTISFF HHHHHHHHHHHHHHHCC >Mature Secondary Structure MQSFFWLTSMLIFDLTVCPILPLFKIFLILITNNFLINFNFVYLFKTFMIRKKHTYSVIR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCHHHHHH IRNILFVFYIVTTISFF HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA