Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621699
Identifier: 117621699
GI number: 117621699
Start: 51127
End: 51678
Strand: Direct
Name: 117621699
Synonym: BAPKO_2552
Alternate gene names: NA
Gene position: 51127-51678 (Clockwise)
Preceding gene: 117621695
Following gene: 117621701
Centisome position: 85.49
GC content: 28.8
Gene sequence:
>552_bases ATGAAAAACAAAAACATAATTAATTTATTATTTTTATTATTAATGACTTCTTGTGAACTATATTCAATAATAATAGGCTC GAAACTTCACTTCAGATCAATAACAATAGACAAAAGAAAAGTAAATTTCATGCTTGAAGGAGTTTCAAAACTTAACAATA GTGACGATGAAACCGTGTACAAAAATTTCAAAGAAAAAATCAAAACACTAAAAATAGACTTAAAATATGCAATTAATGCT GATGAAATCGAGGAAAAATTTTTAATTTTGGAAAGTCTTTTTCAAGAAAAATTAACAACCAAACTAAATGCCTTAAAAGC AACTAGAGCCGATATTGGGGGCCTGCTTGTAATGATTGATGATAATTATGATAATTTTAGCTATATACAGACAAAAGCAA GATCGGCTGGGATAAGTATCTATCTTGCCCAGGATGATACTACTACCAAAACTGATCTTCAAAAAAGAGCAATGAAACAA ATATATAAAGACAGAATACAAGAGCGGTACGACTACATTGACCAAACAATAAAACACCTTGAAGAAAATTAG
Upstream 100 bases:
>100_bases CATGTAGTCTATGTTTATTGGGGGTTGAAAATTTGATATTGGCCTTGTATATTTGTAATATTGCAATATGCTTTTACCCA TATTAATAATAGGGGAAATA
Downstream 100 bases:
>100_bases ATCAATGAAATTATGAAAATATGTGGTCTAAAAATCGTGTGGTCTAGAATCTCTTTAGACTAGAGAATCTCTTATACCTA GAAAATCTCTTATACCTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MKNKNIINLLFLLLMTSCELYSIIIGSKLHFRSITIDKRKVNFMLEGVSKLNNSDDETVYKNFKEKIKTLKIDLKYAINA DEIEEKFLILESLFQEKLTTKLNALKATRADIGGLLVMIDDNYDNFSYIQTKARSAGISIYLAQDDTTTKTDLQKRAMKQ IYKDRIQERYDYIDQTIKHLEEN
Sequences:
>Translated_183_residues MKNKNIINLLFLLLMTSCELYSIIIGSKLHFRSITIDKRKVNFMLEGVSKLNNSDDETVYKNFKEKIKTLKIDLKYAINA DEIEEKFLILESLFQEKLTTKLNALKATRADIGGLLVMIDDNYDNFSYIQTKARSAGISIYLAQDDTTTKTDLQKRAMKQ IYKDRIQERYDYIDQTIKHLEEN >Mature_183_residues MKNKNIINLLFLLLMTSCELYSIIIGSKLHFRSITIDKRKVNFMLEGVSKLNNSDDETVYKNFKEKIKTLKIDLKYAINA DEIEEKFLILESLFQEKLTTKLNALKATRADIGGLLVMIDDNYDNFSYIQTKARSAGISIYLAQDDTTTKTDLQKRAMKQ IYKDRIQERYDYIDQTIKHLEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21378; Mature: 21378
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKNIINLLFLLLMTSCELYSIIIGSKLHFRSITIDKRKVNFMLEGVSKLNNSDDETVY CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHH KNFKEKIKTLKIDLKYAINADEIEEKFLILESLFQEKLTTKLNALKATRADIGGLLVMID HHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE DNYDNFSYIQTKARSAGISIYLAQDDTTTKTDLQKRAMKQIYKDRIQERYDYIDQTIKHL CCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEN HCC >Mature Secondary Structure MKNKNIINLLFLLLMTSCELYSIIIGSKLHFRSITIDKRKVNFMLEGVSKLNNSDDETVY CCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHH KNFKEKIKTLKIDLKYAINADEIEEKFLILESLFQEKLTTKLNALKATRADIGGLLVMID HHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE DNYDNFSYIQTKARSAGISIYLAQDDTTTKTDLQKRAMKQIYKDRIQERYDYIDQTIKHL CCCCCHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEN HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA