Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621701

Identifier: 117621701

GI number: 117621701

Start: 55948

End: 57054

Strand: Direct

Name: 117621701

Synonym: BAPKO_2554

Alternate gene names: NA

Gene position: 55948-57054 (Clockwise)

Preceding gene: 117621699

Following gene: 117621702

Centisome position: 93.55

GC content: 21.86

Gene sequence:

>1107_bases
ATGATAGAAGTTTCAATCAATAAAAAAATCCCAAATTGCCACAACAAACACCAACGCAAATTAATTGTTCTTATTTCAAC
ACTAGCCTACATAAACACCAAATATAAGAAATATACACAAAAAACCATACTCTATTACTTTAATGAAAATTTAAAAAGAA
ATGGTCAAGCTACCACTACATTAAGAACAATGCAAAAATATCTTTATAAATTGGGAAAAGAAATAAAAGTTACAACAAAC
TACTACAAACATATGGGGATAAATTGTGGCACTGAAATTTACTATCACCTTAATTGTGAAAAAAATGAATGCCACTTTAA
AATCAACCAATACTTTCAAGAAAAAAAACAATTTCGATTTACATCTAGAGCTAATAACTACATTAAAGATAAATCTACTA
AAAAGGGTAGTGTAGAGTTGGGGGAGTGTTTTAATAATAAAAATAATAATATAAAAGAAGAAAAGAATAAAAAGATAGAA
AATTATCAAATAATAAAATATGCCAATAAATGCAACTTTAAATGTAAAGAAATTATTCTTTCTATTTTAAATTTAAATAT
TAATAAAGACTTGAAAATTAAAATGCTTAAAGTCTTAAAAATCATTGAGATTAAACTCCTTAAAAATAAAAATTTATTTT
TAAATAAATCTTGCTTTAAAGATAAGCAAAATAAATTAAAAGAAATTCTAGAAAATACCAAAAAAGAATTAGAAAAAAAG
GGATACAATGCCGAACAATTGGAAATAGAATTTAAAAAAATATATGAAAACTACAAAAATAAGCCGCATTTTATTATTGA
ACATCAAAAATATAGCGATTTAAGTAAAATAAATTTCAAATTAGAAAAATCAATCGAATTAAAAAAAGAAAACACACAAA
AAGATTATGAGCATATAAAGGTAAACATTTATAATATTCTTATTGATCAGCTAAAAGAAAAGGTAAATATTGAAATTCTA
AAGCCAATTATAAAAACTTATTTGAATAGCAAAAAGAAATTAGAATATAACAAAGTATTTGGTACGTATCATAATGAATT
ATTAGAACTAATAAAAAATGAAAATATTTTTTTAATGCTAAAAGAAATTAGTAATAAAGCTGTATAA

Upstream 100 bases:

>100_bases
AATAATTAAATTTAATATTTTTTAGAAAAGTCTTTACTTTTAAATCAAAATTATGCATTATATTATTAATTATTATTAAT
CATGAAACAGGAGGAAACTT

Downstream 100 bases:

>100_bases
GGGCTTAATATGCAAAACATAGTAAAATTAAAGCAACTAAATAAACTAATAATAAAATATTTAAATAAAACATTTAATCA
CACAAAAATAATAATGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTTLRTMQKYLYKLGKEIKVTTN
YYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRFTSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIE
NYQIIKYANKCNFKCKEIILSILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK
GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIKVNIYNILIDQLKEKVNIEIL
KPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLMLKEISNKAV

Sequences:

>Translated_368_residues
MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTTLRTMQKYLYKLGKEIKVTTN
YYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRFTSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIE
NYQIIKYANKCNFKCKEIILSILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK
GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIKVNIYNILIDQLKEKVNIEIL
KPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLMLKEISNKAV
>Mature_368_residues
MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTTLRTMQKYLYKLGKEIKVTTN
YYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRFTSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIE
NYQIIKYANKCNFKCKEIILSILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK
GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIKVNIYNILIDQLKEKVNIEIL
KPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLMLKEISNKAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44243; Mature: 44243

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTT
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHH
LRTMQKYLYKLGKEIKVTTNYYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRF
HHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHH
TSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIENYQIIKYANKCNFKCKEIIL
HHHCCCHHCCCCCCCCCEEHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHH
SILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK
HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHC
GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIK
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCEEEECCEEECCCCCCCCHHHHH
VNIYNILIDQLKEKVNIEILKPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLML
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEE
KEISNKAV
EHHCCCCC
>Mature Secondary Structure
MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTT
CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHH
LRTMQKYLYKLGKEIKVTTNYYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRF
HHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHH
TSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIENYQIIKYANKCNFKCKEIIL
HHHCCCHHCCCCCCCCCEEHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHH
SILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK
HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHC
GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIK
CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCEEEECCEEECCCCCCCCHHHHH
VNIYNILIDQLKEKVNIEILKPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLML
HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEE
KEISNKAV
EHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA