Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621701
Identifier: 117621701
GI number: 117621701
Start: 55948
End: 57054
Strand: Direct
Name: 117621701
Synonym: BAPKO_2554
Alternate gene names: NA
Gene position: 55948-57054 (Clockwise)
Preceding gene: 117621699
Following gene: 117621702
Centisome position: 93.55
GC content: 21.86
Gene sequence:
>1107_bases ATGATAGAAGTTTCAATCAATAAAAAAATCCCAAATTGCCACAACAAACACCAACGCAAATTAATTGTTCTTATTTCAAC ACTAGCCTACATAAACACCAAATATAAGAAATATACACAAAAAACCATACTCTATTACTTTAATGAAAATTTAAAAAGAA ATGGTCAAGCTACCACTACATTAAGAACAATGCAAAAATATCTTTATAAATTGGGAAAAGAAATAAAAGTTACAACAAAC TACTACAAACATATGGGGATAAATTGTGGCACTGAAATTTACTATCACCTTAATTGTGAAAAAAATGAATGCCACTTTAA AATCAACCAATACTTTCAAGAAAAAAAACAATTTCGATTTACATCTAGAGCTAATAACTACATTAAAGATAAATCTACTA AAAAGGGTAGTGTAGAGTTGGGGGAGTGTTTTAATAATAAAAATAATAATATAAAAGAAGAAAAGAATAAAAAGATAGAA AATTATCAAATAATAAAATATGCCAATAAATGCAACTTTAAATGTAAAGAAATTATTCTTTCTATTTTAAATTTAAATAT TAATAAAGACTTGAAAATTAAAATGCTTAAAGTCTTAAAAATCATTGAGATTAAACTCCTTAAAAATAAAAATTTATTTT TAAATAAATCTTGCTTTAAAGATAAGCAAAATAAATTAAAAGAAATTCTAGAAAATACCAAAAAAGAATTAGAAAAAAAG GGATACAATGCCGAACAATTGGAAATAGAATTTAAAAAAATATATGAAAACTACAAAAATAAGCCGCATTTTATTATTGA ACATCAAAAATATAGCGATTTAAGTAAAATAAATTTCAAATTAGAAAAATCAATCGAATTAAAAAAAGAAAACACACAAA AAGATTATGAGCATATAAAGGTAAACATTTATAATATTCTTATTGATCAGCTAAAAGAAAAGGTAAATATTGAAATTCTA AAGCCAATTATAAAAACTTATTTGAATAGCAAAAAGAAATTAGAATATAACAAAGTATTTGGTACGTATCATAATGAATT ATTAGAACTAATAAAAAATGAAAATATTTTTTTAATGCTAAAAGAAATTAGTAATAAAGCTGTATAA
Upstream 100 bases:
>100_bases AATAATTAAATTTAATATTTTTTAGAAAAGTCTTTACTTTTAAATCAAAATTATGCATTATATTATTAATTATTATTAAT CATGAAACAGGAGGAAACTT
Downstream 100 bases:
>100_bases GGGCTTAATATGCAAAACATAGTAAAATTAAAGCAACTAAATAAACTAATAATAAAATATTTAAATAAAACATTTAATCA CACAAAAATAATAATGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTTLRTMQKYLYKLGKEIKVTTN YYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRFTSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIE NYQIIKYANKCNFKCKEIILSILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIKVNIYNILIDQLKEKVNIEIL KPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLMLKEISNKAV
Sequences:
>Translated_368_residues MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTTLRTMQKYLYKLGKEIKVTTN YYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRFTSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIE NYQIIKYANKCNFKCKEIILSILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIKVNIYNILIDQLKEKVNIEIL KPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLMLKEISNKAV >Mature_368_residues MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTTLRTMQKYLYKLGKEIKVTTN YYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRFTSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIE NYQIIKYANKCNFKCKEIILSILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIKVNIYNILIDQLKEKVNIEIL KPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLMLKEISNKAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44243; Mature: 44243
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTT CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHH LRTMQKYLYKLGKEIKVTTNYYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRF HHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHH TSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIENYQIIKYANKCNFKCKEIIL HHHCCCHHCCCCCCCCCEEHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHH SILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHC GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIK CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCEEEECCEEECCCCCCCCHHHHH VNIYNILIDQLKEKVNIEILKPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLML HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEE KEISNKAV EHHCCCCC >Mature Secondary Structure MIEVSINKKIPNCHNKHQRKLIVLISTLAYINTKYKKYTQKTILYYFNENLKRNGQATTT CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHH LRTMQKYLYKLGKEIKVTTNYYKHMGINCGTEIYYHLNCEKNECHFKINQYFQEKKQFRF HHHHHHHHHHCCCEEEEEEHHHHHCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHH TSRANNYIKDKSTKKGSVELGECFNNKNNNIKEEKNKKIENYQIIKYANKCNFKCKEIIL HHHCCCHHCCCCCCCCCEEHHHHHCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHH SILNLNINKDLKIKMLKVLKIIEIKLLKNKNLFLNKSCFKDKQNKLKEILENTKKELEKK HHHHCCCCCCHHHHHHHHHHHHHHHEECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHC GYNAEQLEIEFKKIYENYKNKPHFIIEHQKYSDLSKINFKLEKSIELKKENTQKDYEHIK CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCEEEECCEEECCCCCCCCHHHHH VNIYNILIDQLKEKVNIEILKPIIKTYLNSKKKLEYNKVFGTYHNELLELIKNENIFLML HHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEE KEISNKAV EHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA