Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621689

Identifier: 117621689

GI number: 117621689

Start: 43297

End: 44079

Strand: Reverse

Name: 117621689

Synonym: BAPKO_2542

Alternate gene names: NA

Gene position: 44079-43297 (Counterclockwise)

Preceding gene: 117621690

Following gene: 117621688

Centisome position: 73.71

GC content: 28.61

Gene sequence:

>783_bases
ATGAAATACTACATAATTATATGTATGTTTATTTTTCTATTTTTAAATGCTTGCAGTCTAGATTTTGATACCAAACACAA
AGATATTAAATCTCCATCTAATAAGAAATCAAAGCCTAGCACAGAAGAAGGCCCTAGCAGAGAGGAATTAAAGCCTGGCA
CAAAAGAAGGCCTAAATAAAGAAATAAAAAACAAACTACTTAATGGTTTAAAAAATTTAATAGAAACAGCTAACACACAT
AAAGAAAAGTATATAAAAAGAATGGAAGAAGAGCCTTCTGATCAATATGGAATGCCTTTTAATGGTTTGAATTGGGGACC
AGGCACAGAAGATATATCCAGCAATACTGTTAGATCTATAAACTATAGAAGATATACTTATACTCTTTTAAGTGATATTG
ATACTAAGGAATTAAAGGAATTTGCAAATATTTTAACTCTGGCAACAGCATATAGTATTTACAACCTATTTAGCAGCCTT
GGAGTCGATCTTGACATAGTAACTAATCGCTTATACCCCAAAAAAGATACTCTAGATAAACTAGACACTTCAGATTTACA
GAAACTTAAAAATTCACTTGAAAAAATATTATCTATAATAAAAAATATCTCAGAAATGTCAAAACAACTCTTATTAGATT
ATCAAAATGACACAAATCTTATAAAAACAGATGTTAATAAGCTTAAATCTCATGTAAGTGCTCTTTATAATCAATTTAAA
GAAAAAGCTGAAGAATCAGACAAGCTACAAAAAACGGTCATATCATTAATAAAGACCCTTTAA

Upstream 100 bases:

>100_bases
ATATTATATATAATATTAAAATAATTAAATTTAGTGTATAATATTAGAGTAATTAAATTTATTATTTACTAAAGACGGAA
TTATATTCGGGGGAATATTT

Downstream 100 bases:

>100_bases
AGGTTTGGCCTTTTAATTTATTAGCAATTTAAAGAAACGGTATATTTAAGGCTTCATATGGGAAAATATATTATCTATTT
GAATAGATGTTATTAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Virulent Strain Associated Lipoprotein; Antigen P; Borrelia Virulent Strain Associated Lipoprotein; Surface Protein

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKYYIIICMFIFLFLNACSLDFDTKHKDIKSPSNKKSKPSTEEGPSREELKPGTKEGLNKEIKNKLLNGLKNLIETANTH
KEKYIKRMEEEPSDQYGMPFNGLNWGPGTEDISSNTVRSINYRRYTYTLLSDIDTKELKEFANILTLATAYSIYNLFSSL
GVDLDIVTNRLYPKKDTLDKLDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDYQNDTNLIKTDVNKLKSHVSALYNQFK
EKAEESDKLQKTVISLIKTL

Sequences:

>Translated_260_residues
MKYYIIICMFIFLFLNACSLDFDTKHKDIKSPSNKKSKPSTEEGPSREELKPGTKEGLNKEIKNKLLNGLKNLIETANTH
KEKYIKRMEEEPSDQYGMPFNGLNWGPGTEDISSNTVRSINYRRYTYTLLSDIDTKELKEFANILTLATAYSIYNLFSSL
GVDLDIVTNRLYPKKDTLDKLDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDYQNDTNLIKTDVNKLKSHVSALYNQFK
EKAEESDKLQKTVISLIKTL
>Mature_260_residues
MKYYIIICMFIFLFLNACSLDFDTKHKDIKSPSNKKSKPSTEEGPSREELKPGTKEGLNKEIKNKLLNGLKNLIETANTH
KEKYIKRMEEEPSDQYGMPFNGLNWGPGTEDISSNTVRSINYRRYTYTLLSDIDTKELKEFANILTLATAYSIYNLFSSL
GVDLDIVTNRLYPKKDTLDKLDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDYQNDTNLIKTDVNKLKSHVSALYNQFK
EKAEESDKLQKTVISLIKTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29900; Mature: 29900

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYYIIICMFIFLFLNACSLDFDTKHKDIKSPSNKKSKPSTEEGPSREELKPGTKEGLNK
CHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHH
EIKNKLLNGLKNLIETANTHKEKYIKRMEEEPSDQYGMPFNGLNWGPGTEDISSNTVRSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NYRRYTYTLLSDIDTKELKEFANILTLATAYSIYNLFSSLGVDLDIVTNRLYPKKDTLDK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHH
LDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDYQNDTNLIKTDVNKLKSHVSALYNQFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKAEESDKLQKTVISLIKTL
HHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKYYIIICMFIFLFLNACSLDFDTKHKDIKSPSNKKSKPSTEEGPSREELKPGTKEGLNK
CHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHH
EIKNKLLNGLKNLIETANTHKEKYIKRMEEEPSDQYGMPFNGLNWGPGTEDISSNTVRSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
NYRRYTYTLLSDIDTKELKEFANILTLATAYSIYNLFSSLGVDLDIVTNRLYPKKDTLDK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHH
LDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDYQNDTNLIKTDVNKLKSHVSALYNQFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
EKAEESDKLQKTVISLIKTL
HHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA