Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621688

Identifier: 117621688

GI number: 117621688

Start: 41188

End: 41796

Strand: Reverse

Name: 117621688

Synonym: BAPKO_2541

Alternate gene names: NA

Gene position: 41796-41188 (Counterclockwise)

Preceding gene: 117621689

Following gene: 117621685

Centisome position: 69.89

GC content: 26.44

Gene sequence:

>609_bases
ATGAAATACTATATAATTACAAGTATATTTATTTTTCTATTTTTAAATGCTTGCAGTCTAGATTTTGATACTAAACACAA
AGATATTAAATCTCCATCTAATAAGGAATTAAAGCTTGGCATAGAAGAAGACCTAAATAAAGAAATAAAAAACAAACTAC
TTAATGATTTAAAAAATTTAATAGAAACAGCTAACGCACATAAAGAAAAGTATATAAAAATAATGGAAAAAGAACTTTCT
AACCAATATGGAATGAATTTTACTAAGCTTGGTTGGGGACCGGGCAAAGAAAAGGTGTCTGACAATACTGAGAGATCTAT
AAAATTTAGAAGACATACTTATACTCTTTTAAGTGCTATTGATATTAAGGAATTAAAGGAATTTGCAGATATTATGAAAC
TATCGATAAAAAAAGACGTGATATACAACCTATTTAGCAGCCTTGGAGTCGATCTTGACATAGTAACTAATCGCTTATAC
CCCAAAAAAGATACTCTAGATAAACTAGACACTTCAGATTTACAGAAACTTAAAAATTCACTTGAAAAAATATTATCTAT
AATAAAAAATATCTCAGAAATGTCAAAACAACTCTTATTAGATTATTAA

Upstream 100 bases:

>100_bases
AAAACTCAAAATGCTATAAAACTTCTAACATTAAATATATAATATTTAATTACTTTAATAGTATACACTAAAGACTCAAT
TATACTCAAGGAGAGTATTT

Downstream 100 bases:

>100_bases
AATGACACAAATCTTATAAAAACAGATGTTAATAAGCTTAAATCTCATGTAAGTACACTTTATAATCAATTTAAAGAAAA
AACTGAAGAATCAGAAAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Virulent Strain Associated Lipoprotein; Antigen P; Borrelia Virulent Strain Associated Lipoprotein; Surface Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKYYIITSIFIFLFLNACSLDFDTKHKDIKSPSNKELKLGIEEDLNKEIKNKLLNDLKNLIETANAHKEKYIKIMEKELS
NQYGMNFTKLGWGPGKEKVSDNTERSIKFRRHTYTLLSAIDIKELKEFADIMKLSIKKDVIYNLFSSLGVDLDIVTNRLY
PKKDTLDKLDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDY

Sequences:

>Translated_202_residues
MKYYIITSIFIFLFLNACSLDFDTKHKDIKSPSNKELKLGIEEDLNKEIKNKLLNDLKNLIETANAHKEKYIKIMEKELS
NQYGMNFTKLGWGPGKEKVSDNTERSIKFRRHTYTLLSAIDIKELKEFADIMKLSIKKDVIYNLFSSLGVDLDIVTNRLY
PKKDTLDKLDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDY
>Mature_202_residues
MKYYIITSIFIFLFLNACSLDFDTKHKDIKSPSNKELKLGIEEDLNKEIKNKLLNDLKNLIETANAHKEKYIKIMEKELS
NQYGMNFTKLGWGPGKEKVSDNTERSIKFRRHTYTLLSAIDIKELKEFADIMKLSIKKDVIYNLFSSLGVDLDIVTNRLY
PKKDTLDKLDTSDLQKLKNSLEKILSIIKNISEMSKQLLLDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23535; Mature: 23535

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYYIITSIFIFLFLNACSLDFDTKHKDIKSPSNKELKLGIEEDLNKEIKNKLLNDLKNL
CCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
IETANAHKEKYIKIMEKELSNQYGMNFTKLGWGPGKEKVSDNTERSIKFRRHTYTLLSAI
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
DIKELKEFADIMKLSIKKDVIYNLFSSLGVDLDIVTNRLYPKKDTLDKLDTSDLQKLKNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHH
LEKILSIIKNISEMSKQLLLDY
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKYYIITSIFIFLFLNACSLDFDTKHKDIKSPSNKELKLGIEEDLNKEIKNKLLNDLKNL
CCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH
IETANAHKEKYIKIMEKELSNQYGMNFTKLGWGPGKEKVSDNTERSIKFRRHTYTLLSAI
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHCCCHHHHHHHHHHHHHHHHHH
DIKELKEFADIMKLSIKKDVIYNLFSSLGVDLDIVTNRLYPKKDTLDKLDTSDLQKLKNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHH
LEKILSIIKNISEMSKQLLLDY
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA