Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621653
Identifier: 117621653
GI number: 117621653
Start: 4400
End: 5080
Strand: Direct
Name: 117621653
Synonym: BAPKO_2506
Alternate gene names: NA
Gene position: 4400-5080 (Clockwise)
Preceding gene: 117621652
Following gene: 117621654
Centisome position: 7.36
GC content: 18.06
Gene sequence:
>681_bases TTGTTAATATATCTAATATCCTCTTTAATTACAATTTTTTTCATACCAAATGATAAAAATACAGATCATAAGCACAATAA AGAAGATTTAACTTTATATCTTATAAAGTTTTTTAAAAAAATAATAATATTATTGAAATCTAAAGAGCTTTTAGCAGTAT TTATTCTAAATAGCTCTATTCAATTTTTTTATCAACCTTTTTATTTATACTGGCAAGCAATTTTTATTGATAAAAATATA TCTATTAGCATATTTGGAATCATATATGTACTATTTCGCGTATCAGATATTATAGGAGCATGGATATTTAGAAAAATTAA ACATTCAAAATATGATATTTATGTTATTTTAGCTATAATATTTTTATTATCAGTTTTAATAAAAATAGTTTTACATATTT ACATATTTATTACTATAATCATATTTTTAGTAATTTTAATTTCTGTTTATTCTAATAATTTAGAATATTTTTTAAAAAAA AATGTGGATTCAAAAGTTTTAGGAACCTTAACTTCTATTAATAGTACATTATCTCGTATATTTTCATTTTTAGCACTAGG CATATGTTCAATTTTAACTAATTTTATAAGTGCTATATATACATTTGTTTTATTAATACTTATTTTTTGTACATTATCCA TTATTGTAACATATAAATTTAAAAATAATAAAAAAAGTTGA
Upstream 100 bases:
>100_bases ATCATTTGTAAAAATGATATAAAGTATTGGTGCTATTTTAGGTGGATATATTGGAAGTGTACTATATTTATATATTGATA TAAAAATTTACCTAATTTCA
Downstream 100 bases:
>100_bases GAAATAGATATTATTAATATCCTTCTTATGGAAAAGACATTAAAATACTCGTGTAAGGTTATTAAATTCTTTTATTTCTT TTTCATGCTCACAATATACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSIQFFYQPFYLYWQAIFIDKNI SISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAIIFLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKK NVDSKVLGTLTSINSTLSRIFSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS
Sequences:
>Translated_226_residues MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSIQFFYQPFYLYWQAIFIDKNI SISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAIIFLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKK NVDSKVLGTLTSINSTLSRIFSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS >Mature_226_residues MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSIQFFYQPFYLYWQAIFIDKNI SISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAIIFLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKK NVDSKVLGTLTSINSTLSRIFSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26420; Mature: 26420
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSI CHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH QFFYQPFYLYWQAIFIDKNISISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAII HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKKNVDSKVLGTLTSINSTLSRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH FSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MLIYLISSLITIFFIPNDKNTDHKHNKEDLTLYLIKFFKKIIILLKSKELLAVFILNSSI CHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCH QFFYQPFYLYWQAIFIDKNISISIFGIIYVLFRVSDIIGAWIFRKIKHSKYDIYVILAII HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FLLSVLIKIVLHIYIFITIIIFLVILISVYSNNLEYFLKKNVDSKVLGTLTSINSTLSRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHH FSFLALGICSILTNFISAIYTFVLLILIFCTLSIIVTYKFKNNKKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA