Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621652

Identifier: 117621652

GI number: 117621652

Start: 3901

End: 4251

Strand: Direct

Name: 117621652

Synonym: BAPKO_2505

Alternate gene names: NA

Gene position: 3901-4251 (Clockwise)

Preceding gene: 117621651

Following gene: 117621653

Centisome position: 6.52

GC content: 25.36

Gene sequence:

>351_bases
ATGATAGAAAGCAAACATCAAAAATACTATTTTTATTCATTATTTTTGTCAGAACTTGCAAGAACGTTACCCCATGCTGT
ACTAACTATTATTTTAATAAATAAAGGATTATCACTAAAAGATATTGCTATAGTACAAATTTGCTATATGACAGCAATTA
TTATTTTTGAATTTCCATCAGGAATAATATCAGATATTTTTGATAGAAAAATTGTTTACTTAGTATCAATTTTTCTACTA
ATGATTTCTTATTTTATTATTTTTAAAGCTTCTTCATTCGTACTTCTTTGTATTTCTTGGTTTATATATGAGATGTCAGC
TGCTATTAAACACCGGGACAATCGATATTAG

Upstream 100 bases:

>100_bases
TTAATTCTTTAAATAAACAAATTGATATTAGTAATCATAATTTCCTATTTCATTTTATTAATATTCTAAAGAACAAATCC
TGCAAATGTAATAAAGATTT

Downstream 100 bases:

>100_bases
CTTTACTAAGCTATCCCAAAATAATTCAAAAAAGCTAAAAGCTTTTATATCATTTGTAAAAATGATATAAAGTATTGGTG
CTATTTTAGGTGGATATATT

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Protein; MFS-Domain-Containing Protein; MccC-Like Protein

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPSGIISDIFDRKIVYLVSIFLL
MISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY

Sequences:

>Translated_116_residues
MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPSGIISDIFDRKIVYLVSIFLL
MISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY
>Mature_116_residues
MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPSGIISDIFDRKIVYLVSIFLL
MISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13605; Mature: 13605

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
GIISDIFDRKIVYLVSIFLLMISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
GIISDIFDRKIVYLVSIFLLMISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA