Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621652
Identifier: 117621652
GI number: 117621652
Start: 3901
End: 4251
Strand: Direct
Name: 117621652
Synonym: BAPKO_2505
Alternate gene names: NA
Gene position: 3901-4251 (Clockwise)
Preceding gene: 117621651
Following gene: 117621653
Centisome position: 6.52
GC content: 25.36
Gene sequence:
>351_bases ATGATAGAAAGCAAACATCAAAAATACTATTTTTATTCATTATTTTTGTCAGAACTTGCAAGAACGTTACCCCATGCTGT ACTAACTATTATTTTAATAAATAAAGGATTATCACTAAAAGATATTGCTATAGTACAAATTTGCTATATGACAGCAATTA TTATTTTTGAATTTCCATCAGGAATAATATCAGATATTTTTGATAGAAAAATTGTTTACTTAGTATCAATTTTTCTACTA ATGATTTCTTATTTTATTATTTTTAAAGCTTCTTCATTCGTACTTCTTTGTATTTCTTGGTTTATATATGAGATGTCAGC TGCTATTAAACACCGGGACAATCGATATTAG
Upstream 100 bases:
>100_bases TTAATTCTTTAAATAAACAAATTGATATTAGTAATCATAATTTCCTATTTCATTTTATTAATATTCTAAAGAACAAATCC TGCAAATGTAATAAAGATTT
Downstream 100 bases:
>100_bases CTTTACTAAGCTATCCCAAAATAATTCAAAAAAGCTAAAAGCTTTTATATCATTTGTAAAAATGATATAAAGTATTGGTG CTATTTTAGGTGGATATATT
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Permease; Facilitator Superfamily Protein; MFS-Domain-Containing Protein; MccC-Like Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPSGIISDIFDRKIVYLVSIFLL MISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY
Sequences:
>Translated_116_residues MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPSGIISDIFDRKIVYLVSIFLL MISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY >Mature_116_residues MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPSGIISDIFDRKIVYLVSIFLL MISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13605; Mature: 13605
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC GIISDIFDRKIVYLVSIFLLMISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIESKHQKYYFYSLFLSELARTLPHAVLTIILINKGLSLKDIAIVQICYMTAIIIFEFPS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC GIISDIFDRKIVYLVSIFLLMISYFIIFKASSFVLLCISWFIYEMSAAIKHRDNRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA