Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621649
Identifier: 117621649
GI number: 117621649
Start: 1360
End: 1545
Strand: Reverse
Name: 117621649
Synonym: BAPKO_2502
Alternate gene names: NA
Gene position: 1545-1360 (Counterclockwise)
Preceding gene: 117621655
Following gene: NA
Centisome position: 2.58
GC content: 29.57
Gene sequence:
>186_bases TTGCTTAATGATTTTAAGGTATTGAAAAACAAAAAAGGAGAAGATTATCTTTTATCCTTAATGAAAGGATATGAGAATTA TTTTCTAGGTGCGAAGGTTTCAATCGTTGGATTGCATAACAGATCCCAATTGTCAGATTTTGAATTGACAATTGGGATTG TAAAGTTACTATTGCACTTGATTTAA
Upstream 100 bases:
>100_bases CACAAATAAAAAAAGGTATACAAAAATGAGAAAAAAAGAAAAAGAAAATAATTTCATTGTGGCCAGTCTTTACTCATTAA CTAAATAAGATTTTATAACT
Downstream 100 bases:
>100_bases TAACTTTTTTTAAACGATAGTTGGAATCCGTTTATTCCGATATCAAAATTTGGTTCAAACCCTGCAAGCGAAATGCCAAG TTTTTTTCTAAGATTTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MLNDFKVLKNKKGEDYLLSLMKGYENYFLGAKVSIVGLHNRSQLSDFELTIGIVKLLLHLI
Sequences:
>Translated_61_residues MLNDFKVLKNKKGEDYLLSLMKGYENYFLGAKVSIVGLHNRSQLSDFELTIGIVKLLLHLI >Mature_61_residues MLNDFKVLKNKKGEDYLLSLMKGYENYFLGAKVSIVGLHNRSQLSDFELTIGIVKLLLHLI
Specific function: Unknown
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6982; Mature: 6982
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNDFKVLKNKKGEDYLLSLMKGYENYFLGAKVSIVGLHNRSQLSDFELTIGIVKLLLHL CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH I C >Mature Secondary Structure MLNDFKVLKNKKGEDYLLSLMKGYENYFLGAKVSIVGLHNRSQLSDFELTIGIVKLLLHL CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHH I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA