Click here to switch to the map view.

The map label for this gene is 116872427

Identifier: 116872427

GI number: 116872427

Start: 1028535

End: 1029386

Strand: Direct

Name: 116872427

Synonym: lwe1009

Alternate gene names: NA

Gene position: 1028535-1029386 (Clockwise)

Preceding gene: 116872426

Following gene: 116872431

Centisome position: 36.55

GC content: 32.98

Gene sequence:

>852_bases
ATGAAAAAAATTTCTATCAGACAACGTTTTGCTCTTGACCCTCGTGTCTCTAAAGTTCTAATTAGTATTACAATCGCGAT
AATACTTTTTCCTCTTCTAGGAGACTGGATTGTGTATCCTACTTATCTATTTAATGCTATTTATATTACTGCTCAAATGA
CAAAAGGAGACACTTATGGCTCTAGCGTAGAAAGAATTGTTGGAACGATTGTTGGGGGATTACTTGCCGCACTTGTCTAT
CTTTTAGTTCCTAATCATCACTATATCATGATTCCAATTGGAGCGGCACTTGCTATATTGTTGAGTTATCTGTTTACTAA
GAAATTTACGATGGTTATCGTTGTTATTACTGTGATGGTTTTAGTAGGTAAAGGAGACGGAGAGCCGATTGTATTTTTAA
GAGATCGATTATTCGATACGATGATTGGTCTTTCTATTGGCTTTTTGGTGTATGCACTTTATCCAAGGAAAAAAACAGAA
AAATTAAACCAAGTATTTATCTCTCATGAGAAAGAAATGTTAGATAAAATAAAAGCAATAGACATCCATTCAGCAAATGC
AGAAGATTTTTCACCAAAAATAAAAGCATTATGGAAACAACTGATTGAACTAAGGAAAATGCGAGAGCAAATTATTGAAG
ATAGCAGTTTTATTGCTAATATAACATCTGATGAACCAATGCTACGATTCACGCAACTAGTCGAACAAGCAATTAATAAT
ATCGAAATTCTTTATCATGTGACATTAGATAAAGAAACTGAACCTGATTATGAGGTGGTTTTTTCCTATCACCAACAAGC
TTGTCAAAAAGTAATTAATGAGATGGATGCTTTGATAGCAAAACATAATTAA

Upstream 100 bases:

>100_bases
AATCTGACCCAGTAGCATCATTTCATGTAAAAAAATTCGTGGAAAATTTTCTAGCAATTAAAGCTGGAATGGCGGAACTT
GCAGAAGGAGGGAAAGCGAA

Downstream 100 bases:

>100_bases
AAAAGAAGACTGGAGCTGATATTGGCTCCGGTCTTCTTTTTATTCATTAATATCTAAGCTTTTTTTAAACATAGTAATTA
CTTTTTCTAAATCTGCTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MKKISIRQRFALDPRVSKVLISITIAIILFPLLGDWIVYPTYLFNAIYITAQMTKGDTYGSSVERIVGTIVGGLLAALVY
LLVPNHHYIMIPIGAALAILLSYLFTKKFTMVIVVITVMVLVGKGDGEPIVFLRDRLFDTMIGLSIGFLVYALYPRKKTE
KLNQVFISHEKEMLDKIKAIDIHSANAEDFSPKIKALWKQLIELRKMREQIIEDSSFIANITSDEPMLRFTQLVEQAINN
IEILYHVTLDKETEPDYEVVFSYHQQACQKVINEMDALIAKHN

Sequences:

>Translated_283_residues
MKKISIRQRFALDPRVSKVLISITIAIILFPLLGDWIVYPTYLFNAIYITAQMTKGDTYGSSVERIVGTIVGGLLAALVY
LLVPNHHYIMIPIGAALAILLSYLFTKKFTMVIVVITVMVLVGKGDGEPIVFLRDRLFDTMIGLSIGFLVYALYPRKKTE
KLNQVFISHEKEMLDKIKAIDIHSANAEDFSPKIKALWKQLIELRKMREQIIEDSSFIANITSDEPMLRFTQLVEQAINN
IEILYHVTLDKETEPDYEVVFSYHQQACQKVINEMDALIAKHN
>Mature_283_residues
MKKISIRQRFALDPRVSKVLISITIAIILFPLLGDWIVYPTYLFNAIYITAQMTKGDTYGSSVERIVGTIVGGLLAALVY
LLVPNHHYIMIPIGAALAILLSYLFTKKFTMVIVVITVMVLVGKGDGEPIVFLRDRLFDTMIGLSIGFLVYALYPRKKTE
KLNQVFISHEKEMLDKIKAIDIHSANAEDFSPKIKALWKQLIELRKMREQIIEDSSFIANITSDEPMLRFTQLVEQAINN
IEILYHVTLDKETEPDYEVVFSYHQQACQKVINEMDALIAKHN

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32253; Mature: 32253

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISIRQRFALDPRVSKVLISITIAIILFPLLGDWIVYPTYLFNAIYITAQMTKGDTYG
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCH
SSVERIVGTIVGGLLAALVYLLVPNHHYIMIPIGAALAILLSYLFTKKFTMVIVVITVMV
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGKGDGEPIVFLRDRLFDTMIGLSIGFLVYALYPRKKTEKLNQVFISHEKEMLDKIKAI
HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIHSANAEDFSPKIKALWKQLIELRKMREQIIEDSSFIANITSDEPMLRFTQLVEQAINN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCC
IEILYHVTLDKETEPDYEVVFSYHQQACQKVINEMDALIAKHN
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKISIRQRFALDPRVSKVLISITIAIILFPLLGDWIVYPTYLFNAIYITAQMTKGDTYG
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCH
SSVERIVGTIVGGLLAALVYLLVPNHHYIMIPIGAALAILLSYLFTKKFTMVIVVITVMV
HHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVGKGDGEPIVFLRDRLFDTMIGLSIGFLVYALYPRKKTEKLNQVFISHEKEMLDKIKAI
HHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
DIHSANAEDFSPKIKALWKQLIELRKMREQIIEDSSFIANITSDEPMLRFTQLVEQAINN
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCHHHHHHHHHHHHHCC
IEILYHVTLDKETEPDYEVVFSYHQQACQKVINEMDALIAKHN
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA