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The map label for this gene is ykrA [H]

Identifier: 116872431

GI number: 116872431

Start: 1032875

End: 1033645

Strand: Direct

Name: ykrA [H]

Synonym: lwe1013

Alternate gene names: 116872431

Gene position: 1032875-1033645 (Clockwise)

Preceding gene: 116872427

Following gene: 116872436

Centisome position: 36.7

GC content: 37.61

Gene sequence:

>771_bases
ATGAGTAAAATTGTGTTTTTTGATGTAGATGGCACGCTTGTAGGCGAAACAAAAGAAATTCCAGCATCCGCAAAACAAGC
AATTGCTAAATTGAAAGAAAATGGCGTTTATGTGGCTATAGCAACAGGCCGTGGTCCTTTTATGTTAGACGAAATTAGAA
AAGAACTAGATATTCATTCTTACATTTGTTATAACGGACAATATGTTATCTTTGAAGGCAAAGAAATTTATGCCAAACCA
TTACCAACAGAATCTTTAGAGCGACTTATTAGTGTGGCATCTGAGCATGAACATCCGATTGTTTTTTCTGGGAAAGAATC
GATGCGTGCGAACTTGCCGGATCATGACCGAGTAACAAGAGGAATGAATTCTATTAAACGAAGCTATCCAAAAGTGGACG
CTAATTACTATAAAGGTCGGGATATTTTCCAATGTTTGCTTTTCTGCGAGGAGTCCTATGATGCTTATTATCGAAAAGAA
TTTAAACAATATGGCTTTTTACGTTGGCATGAAGTATCTGTGGATGTTTGTCCAGCAGATGGTTCAAAAGCGGAAGGCAT
AAAACAAATGATTAAAAAACTGGGCTTTTCGATGGAAGATACTTACGCATTTGGCGATGGCTTGAATGATATCGCGATGC
TTCAAGCTGTCGGAACAGGTGTGGCAATGGGAAATGGTCGCGATGAAGTAAAAGCAGTCGCTGATTATATTACTGAACAT
GTAGATGAAGATGGCATTTATAAAGCATTAGAGCATCTTAAACTAATTTAA

Upstream 100 bases:

>100_bases
TATTTTGTGCTTTATGGCAGGTTGGGATTTTTTAGTGGTTTTCTGCTATAATTTAATTTATGTAATTTAAAAATGGATAC
AGGATAGAGGCGTTTAATCA

Downstream 100 bases:

>100_bases
AAGCAAAAGCGAGGCCACTATTTTAGTGTAGCCTCGTTTTTTGTTGTTACAGTTGTCTTTTCCAGTTTTTGTTTAATAAA
TTTAAGTTGTGCGACGATAA

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDIHSYICYNGQYVIFEGKEIYAKP
LPTESLERLISVASEHEHPIVFSGKESMRANLPDHDRVTRGMNSIKRSYPKVDANYYKGRDIFQCLLFCEESYDAYYRKE
FKQYGFLRWHEVSVDVCPADGSKAEGIKQMIKKLGFSMEDTYAFGDGLNDIAMLQAVGTGVAMGNGRDEVKAVADYITEH
VDEDGIYKALEHLKLI

Sequences:

>Translated_256_residues
MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDIHSYICYNGQYVIFEGKEIYAKP
LPTESLERLISVASEHEHPIVFSGKESMRANLPDHDRVTRGMNSIKRSYPKVDANYYKGRDIFQCLLFCEESYDAYYRKE
FKQYGFLRWHEVSVDVCPADGSKAEGIKQMIKKLGFSMEDTYAFGDGLNDIAMLQAVGTGVAMGNGRDEVKAVADYITEH
VDEDGIYKALEHLKLI
>Mature_255_residues
SKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDIHSYICYNGQYVIFEGKEIYAKPL
PTESLERLISVASEHEHPIVFSGKESMRANLPDHDRVTRGMNSIKRSYPKVDANYYKGRDIFQCLLFCEESYDAYYRKEF
KQYGFLRWHEVSVDVCPADGSKAEGIKQMIKKLGFSMEDTYAFGDGLNDIAMLQAVGTGVAMGNGRDEVKAVADYITEHV
DEDGIYKALEHLKLI

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI1786982, Length=258, Percent_Identity=29.8449612403101, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28865; Mature: 28734

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDIHS
CCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCHHH
YICYNGQYVIFEGKEIYAKPLPTESLERLISVASEHEHPIVFSGKESMRANLPDHDRVTR
EEEECCEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCEEECCCHHHCCCCCCHHHHHH
GMNSIKRSYPKVDANYYKGRDIFQCLLFCEESYDAYYRKEFKQYGFLRWHEVSVDVCPAD
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC
GSKAEGIKQMIKKLGFSMEDTYAFGDGLNDIAMLQAVGTGVAMGNGRDEVKAVADYITEH
CCHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHH
VDEDGIYKALEHLKLI
CCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDIHS
CEEEEEECCCEEECCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCHHH
YICYNGQYVIFEGKEIYAKPLPTESLERLISVASEHEHPIVFSGKESMRANLPDHDRVTR
EEEECCEEEEEECCEEEECCCCHHHHHHHHHHHHCCCCCEEECCCHHHCCCCCCHHHHHH
GMNSIKRSYPKVDANYYKGRDIFQCLLFCEESYDAYYRKEFKQYGFLRWHEVSVDVCPAD
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC
GSKAEGIKQMIKKLGFSMEDTYAFGDGLNDIAMLQAVGTGVAMGNGRDEVKAVADYITEH
CCHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHH
VDEDGIYKALEHLKLI
CCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]