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The map label for this gene is liaF [H]

Identifier: 116872422

GI number: 116872422

Start: 1024382

End: 1025095

Strand: Direct

Name: liaF [H]

Synonym: lwe1004

Alternate gene names: 116872422

Gene position: 1024382-1025095 (Clockwise)

Preceding gene: 116872421

Following gene: 116872423

Centisome position: 36.4

GC content: 34.59

Gene sequence:

>714_bases
TTGAAAAAAATGGAAAGCTCGGTTGTTTTTATATTTTTAATTGCGATAATTGTTGGCGTTGGATTAGAGATGTTATTTCA
ATGGGAATTACTTATTTTGTTTGCTCTTGGGATATTTTTCATCTTTACCTCTAGAAAAGCAAGTGCCACGAAAAAAAGTG
CAAGAAATTCTTTGTTTATTGGTATTGTATTTATCATTATCGCCGTATTACTTACAACCACTTTCAAAGTAGGGCTTGTT
GTTGCTGGTATTTATGCGATTATCCATTATATTAGCCGGAAGCGGGCACCTCAATTATTAATGCTCAAAACAAGAGAACC
AGATAGTAAGATTGACCGCACAGATAAATTTATCCGTAATCAGTGGTTCGGTAATCAGCGAATCTTAGATGTAGTATACG
AATGGGATGATATCAACATCCAAACAGGCATTGGCGATACGATTCTAGATTTAGGAAATACCGTTCTTCCAACTGGTGAA
AGTATTATTATGATCCGTAGTGTTTCAGGGAAAATCCGTATACTTGTGCCATTTGATATTGGTATTTGTATTGAACATTC
CGCGATTTTTGGAAATATCCAATATGATAAAGAAAGCACCTCTATTCAAAATAATAGCATTAAGGTCTACTCAGATAATT
ACGAAAGTTCTGCACGAAAAGTGAAAATCATGACTTCTGTAATCTTCGGAGATTTAGAGGTGATTAGGCTATGA

Upstream 100 bases:

>100_bases
TCTGTTAGCAAATCCTCGCTATAATGAACACAGCATGTACAAAGTAACGTAAAGCGAGAAGTAGCTTTGTCTAAAGAATG
ACTTAGGGAGGTGTGTCAGC

Downstream 100 bases:

>100_bases
GTTTTTCAAAATTGATGATGGCAGTTTGCTCTGGTTTACTACTTGTTGCGACTGCCATTGGAACGGTTGGATACTATTTT
TTTAGTGAGGGTTCTTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKKMESSVVFIFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLV
VAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
SIIMIRSVSGKIRILVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL

Sequences:

>Translated_237_residues
MKKMESSVVFIFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLV
VAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
SIIMIRSVSGKIRILVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL
>Mature_237_residues
MKKMESSVVFIFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLV
VAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
SIIMIRSVSGKIRILVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL

Specific function: Unknown

COG id: COG4758

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016975 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26777; Mature: 26777

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMESSVVFIFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
GIVFIIIAVLLTTTFKVGLVVAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
QWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGESIIMIRSVSGKIRILVPFDI
HCCCCCEEEEEEEECCCCEEECCCCHHHHHCCCEECCCCCCEEEEEECCCEEEEEEEECC
GICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL
CEEEECCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MKKMESSVVFIFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
GIVFIIIAVLLTTTFKVGLVVAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
QWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGESIIMIRSVSGKIRILVPFDI
HCCCCCEEEEEEEECCCCEEECCCCHHHHHCCCEECCCCCCEEEEEECCCEEEEEEEECC
GICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL
CEEEECCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]