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The map label for this gene is yitL [H]

Identifier: 116872421

GI number: 116872421

Start: 1023374

End: 1024246

Strand: Direct

Name: yitL [H]

Synonym: lwe1003

Alternate gene names: 116872421

Gene position: 1023374-1024246 (Clockwise)

Preceding gene: 116872420

Following gene: 116872422

Centisome position: 36.37

GC content: 37.92

Gene sequence:

>873_bases
GTGAATAACTATATTGGCAAAAGCCAAGTAATGACAGTAAAAGAAATCCAAGAAACAGGTTGGCTCCTTGAGAAAGATGA
AGTAACTGTTTTTTTATCTAAATCAAATACACATGAAACAGAACTGGCTGTTGGGGCTGAATTAACAGTCTTTATTTTTG
TGGATTATGACCGTGAAATCGCAGCAACAACAATTATTCCAAAAATTCAAGTAGGACATTATGGCTGGGGCACAGTAACC
GAAGTGCGTAAACATTTGGGTGTCTTTGTCGATATCGGTATCGAAAAAGACGTCGTTGTTTCATTAGATGACTTGCCAGC
ACTACTGCATTTATGGCCAAAAAAAGAAGACCGCTTAATGATTGCCCTTCGAGTAGATGAAGAAAATCGTATTTGGGGAG
TTTTAGCAGAGGAAGAACAATTCCGCGCTATCGCTGTCCGAGCAGAACAAGAATTATTCAATCAAAATATCGAAGGAACA
ATTTATCGTTTACTTAAAATTGGTTCCTTTGTTTTCACAGATGATTTCCATATCGGCTTTATTCATGAAAGTGAACGTAC
ATCTGAACCGAGAATGGGCGAACGTGTAAAAGCACGCGTTATTGCTGTGAAACCAGATGGATCACTAAATTTATCGCTCC
GTGGCAGAGCACATGAAGTGTTAAATGACGATGCAGAAATGATTTTAACCTATTTGCGAAGTGTTGGTGGAGAAATGCCG
TTTGGTGACAAATCAGATCCAGATGCAATTCGAGCAAAATTTGGAATAAGTAAAGCACAATTTAAACGTGCAATTGGTAC
ACTTTTGAAGGCTAAACGGATTACTCAAGAAAATGGGGTTATAACTAAATTATTAGAAGAAACATCCGACTAA

Upstream 100 bases:

>100_bases
ACATATTGATTAAATTTGATTTCTACATAGTAGGTAGCCTTAAAAGCATAGATACGCTATAATGGAACAAGACTATTCTT
AATAAAAAGGTGGAAAAAAA

Downstream 100 bases:

>100_bases
AGTAGTAGTGGATGTTCCAACTAGCGCGGTTTGTGTCTGTTAGCAAATCCTCGCTATAATGAACACAGCATGTACAAAGT
AACGTAAAGCGAGAAGTAGC

Product: RNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNNYIGKSQVMTVKEIQETGWLLEKDEVTVFLSKSNTHETELAVGAELTVFIFVDYDREIAATTIIPKIQVGHYGWGTVT
EVRKHLGVFVDIGIEKDVVVSLDDLPALLHLWPKKEDRLMIALRVDEENRIWGVLAEEEQFRAIAVRAEQELFNQNIEGT
IYRLLKIGSFVFTDDFHIGFIHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAHEVLNDDAEMILTYLRSVGGEMP
FGDKSDPDAIRAKFGISKAQFKRAIGTLLKAKRITQENGVITKLLEETSD

Sequences:

>Translated_290_residues
MNNYIGKSQVMTVKEIQETGWLLEKDEVTVFLSKSNTHETELAVGAELTVFIFVDYDREIAATTIIPKIQVGHYGWGTVT
EVRKHLGVFVDIGIEKDVVVSLDDLPALLHLWPKKEDRLMIALRVDEENRIWGVLAEEEQFRAIAVRAEQELFNQNIEGT
IYRLLKIGSFVFTDDFHIGFIHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAHEVLNDDAEMILTYLRSVGGEMP
FGDKSDPDAIRAKFGISKAQFKRAIGTLLKAKRITQENGVITKLLEETSD
>Mature_290_residues
MNNYIGKSQVMTVKEIQETGWLLEKDEVTVFLSKSNTHETELAVGAELTVFIFVDYDREIAATTIIPKIQVGHYGWGTVT
EVRKHLGVFVDIGIEKDVVVSLDDLPALLHLWPKKEDRLMIALRVDEENRIWGVLAEEEQFRAIAVRAEQELFNQNIEGT
IYRLLKIGSFVFTDDFHIGFIHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAHEVLNDDAEMILTYLRSVGGEMP
FGDKSDPDAIRAKFGISKAQFKRAIGTLLKAKRITQENGVITKLLEETSD

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32784; Mature: 32784

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNYIGKSQVMTVKEIQETGWLLEKDEVTVFLSKSNTHETELAVGAELTVFIFVDYDREI
CCCCCCCHHEEEHHHHHHCCCEEECCCEEEEEECCCCCCCEEEECCEEEEEEEEECCCCE
AATTIIPKIQVGHYGWGTVTEVRKHLGVFVDIGIEKDVVVSLDDLPALLHLWPKKEDRLM
EEEEECCEEEECCCCCCCHHHHHHHCCEEEEECCCCCEEEEECCCCHHHHCCCCCCCCEE
IALRVDEENRIWGVLAEEEQFRAIAVRAEQELFNQNIEGTIYRLLKIGSFVFTDDFHIGF
EEEEECCCCCEEEEEECCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHCCEEEECCEEEEE
IHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAHEVLNDDAEMILTYLRSVGGEMP
EECCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCC
FGDKSDPDAIRAKFGISKAQFKRAIGTLLKAKRITQENGVITKLLEETSD
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNNYIGKSQVMTVKEIQETGWLLEKDEVTVFLSKSNTHETELAVGAELTVFIFVDYDREI
CCCCCCCHHEEEHHHHHHCCCEEECCCEEEEEECCCCCCCEEEECCEEEEEEEEECCCCE
AATTIIPKIQVGHYGWGTVTEVRKHLGVFVDIGIEKDVVVSLDDLPALLHLWPKKEDRLM
EEEEECCEEEECCCCCCCHHHHHHHCCEEEEECCCCCEEEEECCCCHHHHCCCCCCCCEE
IALRVDEENRIWGVLAEEEQFRAIAVRAEQELFNQNIEGTIYRLLKIGSFVFTDDFHIGF
EEEEECCCCCEEEEEECCCCEEEEEEEHHHHHHCCCCCHHHHHHHHHCCEEEECCEEEEE
IHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAHEVLNDDAEMILTYLRSVGGEMP
EECCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCC
FGDKSDPDAIRAKFGISKAQFKRAIGTLLKAKRITQENGVITKLLEETSD
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]