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The map label for this gene is yhbA [H]

Identifier: 116872331

GI number: 116872331

Start: 944006

End: 945139

Strand: Direct

Name: yhbA [H]

Synonym: lwe0913

Alternate gene names: 116872331

Gene position: 944006-945139 (Clockwise)

Preceding gene: 116872329

Following gene: 116872332

Centisome position: 33.55

GC content: 39.86

Gene sequence:

>1134_bases
GTGAAACCAGAACCGAATTACACTTTATTGAAAAAAGAGTTAATTGCATATGCACATGAAATCGGGATACAAAAAATCGG
TTTTACAACAGCAGATCCGTTTTTATTTTTAAAAGAAAGATTACTTGAGGCAGAAGCATTAGATCTTTTTACAGGATTTG
AACATCCCATTATAAATGAACGCGTCTATCCTGAACTAATTTTCAAAGAACCTCAATCAATTATTGCGATCGCTCTTGCT
TACCCATCTAAATTAAAAGAAGCGCCTGTAAGTAAAAAAGGGGCAAGACGTGGCGTATTTGCTAGGGCATCATGGGGGAT
TGATTATCATACCATCTTACGAGAAAAATTAGCGCTCCTTGAAACTTTTTTAAGCGAACGATTACCAGGCGTACGAATGA
AATCGATGGTAGATACAGGCGAATTATCAGATGTTGCTGTAGCAGAACGAGCTGGTATTGGCTGGCGTGGGAAAAACACT
TTGCTAATAACGCCAGAATACGGCTCATGGCTTTATTTAGGTGAGATGATAACCAATATACCTTTCGAACCTGATACACC
TGCTAGCGACTTGTGTGGAAGCTGTAATCAATGTGTCAAAGCTTGCCCGACAGGTTCCTTGTTAGGTGAAGGGAAAATGA
ATCCGAAAATCTGTTTAAGTTATCTTACCCAAACAAAAGACTTTCTAGATGAAAAATATCGCGAAGTGTTGCATAATCGT
TTGTATGGTTGTGACACTTGTCAAGTGGTCTGTCCGTATAATCGCGGACATGATTTTCATTTTCATGAGGAAATGGAGCC
AAATCCTGAACTTGTTCGTCCAGAATTAAAGCCACTTCTACGTATTTCGAATCGCGCTTTTAAAGAGCAATTTGGTGATA
TGGCTGGTTCGTGGCGTGGGAAAAAACCAATCCAACGTAATGCGATTATTATTTTAGCTCGCTACAAAGATAAAACAGCA
GTACCCGACTTAATCGACTGCTTACAAAACGATCCAAGACCAGTCATTCGAGGAACAGCAGGTTGGGCGTTACGTAAAAT
CGGCGGAGAAGCTGCAGAAGAAGCAGTTAGAGAGGCCCTTCAAACCGAACAAGACGAACAAGTTTTACAAGAATTAACAG
CTATACCAAATTAA

Upstream 100 bases:

>100_bases
TATTTTTATAAATCCTGTTATCAACGCAGTGTTTCGACCTTTTTAAGCGAAGCATTGCGTTTATTTTATTGCCAAAAAAT
AAGAAGAGGAGGGCTTTTTT

Downstream 100 bases:

>100_bases
TAGAAACCAGGTGAAAAGAAATGCCAAATCATATCGTACTATATCAACCAGAAATCCCTGCAAATACCGGAAATATCTCC
AGAACTTGTGCTGGAACAGA

Product: Fe-S protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKPEPNYTLLKKELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPIINERVYPELIFKEPQSIIAIALA
YPSKLKEAPVSKKGARRGVFARASWGIDYHTILREKLALLETFLSERLPGVRMKSMVDTGELSDVAVAERAGIGWRGKNT
LLITPEYGSWLYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLHNR
LYGCDTCQVVCPYNRGHDFHFHEEMEPNPELVRPELKPLLRISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTA
VPDLIDCLQNDPRPVIRGTAGWALRKIGGEAAEEAVREALQTEQDEQVLQELTAIPN

Sequences:

>Translated_377_residues
MKPEPNYTLLKKELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPIINERVYPELIFKEPQSIIAIALA
YPSKLKEAPVSKKGARRGVFARASWGIDYHTILREKLALLETFLSERLPGVRMKSMVDTGELSDVAVAERAGIGWRGKNT
LLITPEYGSWLYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLHNR
LYGCDTCQVVCPYNRGHDFHFHEEMEPNPELVRPELKPLLRISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTA
VPDLIDCLQNDPRPVIRGTAGWALRKIGGEAAEEAVREALQTEQDEQVLQELTAIPN
>Mature_377_residues
MKPEPNYTLLKKELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPIINERVYPELIFKEPQSIIAIALA
YPSKLKEAPVSKKGARRGVFARASWGIDYHTILREKLALLETFLSERLPGVRMKSMVDTGELSDVAVAERAGIGWRGKNT
LLITPEYGSWLYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLHNR
LYGCDTCQVVCPYNRGHDFHFHEEMEPNPELVRPELKPLLRISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTA
VPDLIDCLQNDPRPVIRGTAGWALRKIGGEAAEEAVREALQTEQDEQVLQELTAIPN

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=284, Percent_Identity=29.9295774647887, Blast_Score=151, Evalue=8e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42533; Mature: 42533

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPEPNYTLLKKELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPIINE
CCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RVYPELIFKEPQSIIAIALAYPSKLKEAPVSKKGARRGVFARASWGIDYHTILREKLALL
HHHHHHHHHCCHHHEEEHHHCCHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
ETFLSERLPGVRMKSMVDTGELSDVAVAERAGIGWRGKNTLLITPEYGSWLYLGEMITNI
HHHHHHCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEHHHHHHHCC
PFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLHNR
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGCDTCQVVCPYNRGHDFHFHEEMEPNPELVRPELKPLLRISNRAFKEQFGDMAGSWRG
CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KKPIQRNAIIILARYKDKTAVPDLIDCLQNDPRPVIRGTAGWALRKIGGEAAEEAVREAL
CCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHH
QTEQDEQVLQELTAIPN
HCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPEPNYTLLKKELIAYAHEIGIQKIGFTTADPFLFLKERLLEAEALDLFTGFEHPIINE
CCCCCCHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
RVYPELIFKEPQSIIAIALAYPSKLKEAPVSKKGARRGVFARASWGIDYHTILREKLALL
HHHHHHHHHCCHHHEEEHHHCCHHHHHCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH
ETFLSERLPGVRMKSMVDTGELSDVAVAERAGIGWRGKNTLLITPEYGSWLYLGEMITNI
HHHHHHCCCCCHHHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEEHHHHHHHCC
PFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPKICLSYLTQTKDFLDEKYREVLHNR
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LYGCDTCQVVCPYNRGHDFHFHEEMEPNPELVRPELKPLLRISNRAFKEQFGDMAGSWRG
CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
KKPIQRNAIIILARYKDKTAVPDLIDCLQNDPRPVIRGTAGWALRKIGGEAAEEAVREAL
CCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHCCHHHHHHHHHHH
QTEQDEQVLQELTAIPN
HCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]