Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
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Accession | NC_008555 |
Length | 2,814,130 |
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The map label for this gene is 116872302
Identifier: 116872302
GI number: 116872302
Start: 914847
End: 915203
Strand: Direct
Name: 116872302
Synonym: lwe0884
Alternate gene names: NA
Gene position: 914847-915203 (Clockwise)
Preceding gene: 116872301
Following gene: 116872303
Centisome position: 32.51
GC content: 33.89
Gene sequence:
>357_bases TTGTCTGCTGTAGAGAAAAACTTTCCAGAGCAAATTTTAAAAAGATATGTAAATTTATTAGATGCATTTAAGACCTTTTA TGAACAACCTAACCTCTGTAGCAACGCGTTTGAACAAATGAGTTTAGAAGCAGCAGAAGGTGATAAAGATTTAGAGAATA AAGTAAAACTATTTTGGAATGCACATTTGCCTATTATGATGAGTGTTGACGGTTGTTATGAATATTATGCTATCGCTTTA AATGACGGAAGTGTTGTTCATGGTTCGGAACCTGAATTTGAAGAAAGTTTGGTTGTAGCAGATTCATTTGCGAATTTCTT ACTGAAAATCGTGGCCGGTGAAATTGGGATAAGTTAA
Upstream 100 bases:
>100_bases AAGTTAGAGACGAATGGAATGCTAGTTAGAGGAGGTAGCTTAAATCGAACCAATAAATCATTTTTTTGAATGAGCGAAAA ATAATAATTGGCAATTAGAT
Downstream 100 bases:
>100_bases AATTAATTAGGAAATTTGCTATAATAAGAAAAACGTTTCAGAAAGGAGAGGACTATGGATAATAAACTAGAATTTACAAC GATTGAAGAATATATTACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MSAVEKNFPEQILKRYVNLLDAFKTFYEQPNLCSNAFEQMSLEAAEGDKDLENKVKLFWNAHLPIMMSVDGCYEYYAIAL NDGSVVHGSEPEFEESLVVADSFANFLLKIVAGEIGIS
Sequences:
>Translated_118_residues MSAVEKNFPEQILKRYVNLLDAFKTFYEQPNLCSNAFEQMSLEAAEGDKDLENKVKLFWNAHLPIMMSVDGCYEYYAIAL NDGSVVHGSEPEFEESLVVADSFANFLLKIVAGEIGIS >Mature_117_residues SAVEKNFPEQILKRYVNLLDAFKTFYEQPNLCSNAFEQMSLEAAEGDKDLENKVKLFWNAHLPIMMSVDGCYEYYAIALN DGSVVHGSEPEFEESLVVADSFANFLLKIVAGEIGIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13249; Mature: 13118
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAVEKNFPEQILKRYVNLLDAFKTFYEQPNLCSNAFEQMSLEAAEGDKDLENKVKLFWN CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHEEC AHLPIMMSVDGCYEYYAIALNDGSVVHGSEPEFEESLVVADSFANFLLKIVAGEIGIS CCCCEEEECCCCEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAVEKNFPEQILKRYVNLLDAFKTFYEQPNLCSNAFEQMSLEAAEGDKDLENKVKLFWN CCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHEEC AHLPIMMSVDGCYEYYAIALNDGSVVHGSEPEFEESLVVADSFANFLLKIVAGEIGIS CCCCEEEECCCCEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA