Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872303

Identifier: 116872303

GI number: 116872303

Start: 915258

End: 915650

Strand: Direct

Name: 116872303

Synonym: lwe0885

Alternate gene names: NA

Gene position: 915258-915650 (Clockwise)

Preceding gene: 116872302

Following gene: 116872304

Centisome position: 32.52

GC content: 35.62

Gene sequence:

>393_bases
ATGGATAATAAACTAGAATTTACAACGATTGAAGAATATATTACCCAAGCGCCAGCAGAAACAAAAGCAGTACTTCAAAA
AATACGAGAGACAATTCAAGCTGCTGCCCCAGAAGCAACAGAGAAAATCAGTTATCAAATGCCAACTTTTTATTTCGAAG
GCAATCTAGTGCACTTTGCTGTTGCGAAAAATCACTACGGGTTTTATCCGGCGCCTAGTGGCATTTCTGCATTTGAGAAG
CAATTAGGAAAGTATAAATATTCTAAAGGTGCTGTTCAATTCCCGATTAATGAAGAAGTTCCTTATGATTTAATACGAGA
AATGACGCTTTTCCGATTAGCAGAAAATAAACAAAAAGCAGCAGAAAAGCTAGCAAAGAAAAAGAAAAAATAA

Upstream 100 bases:

>100_bases
GAATTTCTTACTGAAAATCGTGGCCGGTGAAATTGGGATAAGTTAAAATTAATTAGGAAATTTGCTATAATAAGAAAAAC
GTTTCAGAAAGGAGAGGACT

Downstream 100 bases:

>100_bases
GTTTGAGACTTTCATCAACGTGATGAAAGTCTTTTTGTTCGGTCTTTTATTTACAAAAGACTAGACATTTAAAATTAAAT
GAGTATAATAATAAATAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFAVAKNHYGFYPAPSGISAFEK
QLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKAAEKLAKKKKK

Sequences:

>Translated_130_residues
MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFAVAKNHYGFYPAPSGISAFEK
QLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKAAEKLAKKKKK
>Mature_130_residues
MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFAVAKNHYGFYPAPSGISAFEK
QLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKAAEKLAKKKKK

Specific function: Unknown

COG id: COG5646

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14887; Mature: 14887

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFA
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCEEEEE
VAKNHYGFYPAPSGISAFEKQLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKA
EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
AEKLAKKKKK
HHHHHHHCCC
>Mature Secondary Structure
MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFA
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCEEEEE
VAKNHYGFYPAPSGISAFEKQLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKA
EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH
AEKLAKKKKK
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA