Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
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Accession | NC_008555 |
Length | 2,814,130 |
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The map label for this gene is 116872303
Identifier: 116872303
GI number: 116872303
Start: 915258
End: 915650
Strand: Direct
Name: 116872303
Synonym: lwe0885
Alternate gene names: NA
Gene position: 915258-915650 (Clockwise)
Preceding gene: 116872302
Following gene: 116872304
Centisome position: 32.52
GC content: 35.62
Gene sequence:
>393_bases ATGGATAATAAACTAGAATTTACAACGATTGAAGAATATATTACCCAAGCGCCAGCAGAAACAAAAGCAGTACTTCAAAA AATACGAGAGACAATTCAAGCTGCTGCCCCAGAAGCAACAGAGAAAATCAGTTATCAAATGCCAACTTTTTATTTCGAAG GCAATCTAGTGCACTTTGCTGTTGCGAAAAATCACTACGGGTTTTATCCGGCGCCTAGTGGCATTTCTGCATTTGAGAAG CAATTAGGAAAGTATAAATATTCTAAAGGTGCTGTTCAATTCCCGATTAATGAAGAAGTTCCTTATGATTTAATACGAGA AATGACGCTTTTCCGATTAGCAGAAAATAAACAAAAAGCAGCAGAAAAGCTAGCAAAGAAAAAGAAAAAATAA
Upstream 100 bases:
>100_bases GAATTTCTTACTGAAAATCGTGGCCGGTGAAATTGGGATAAGTTAAAATTAATTAGGAAATTTGCTATAATAAGAAAAAC GTTTCAGAAAGGAGAGGACT
Downstream 100 bases:
>100_bases GTTTGAGACTTTCATCAACGTGATGAAAGTCTTTTTGTTCGGTCTTTTATTTACAAAAGACTAGACATTTAAAATTAAAT GAGTATAATAATAAATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFAVAKNHYGFYPAPSGISAFEK QLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKAAEKLAKKKKK
Sequences:
>Translated_130_residues MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFAVAKNHYGFYPAPSGISAFEK QLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKAAEKLAKKKKK >Mature_130_residues MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFAVAKNHYGFYPAPSGISAFEK QLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKAAEKLAKKKKK
Specific function: Unknown
COG id: COG5646
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14887; Mature: 14887
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFA CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCEEEEE VAKNHYGFYPAPSGISAFEKQLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKA EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH AEKLAKKKKK HHHHHHHCCC >Mature Secondary Structure MDNKLEFTTIEEYITQAPAETKAVLQKIRETIQAAAPEATEKISYQMPTFYFEGNLVHFA CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEECCCEEEEE VAKNHYGFYPAPSGISAFEKQLGKYKYSKGAVQFPINEEVPYDLIREMTLFRLAENKQKA EECCCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHH AEKLAKKKKK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA