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The map label for this gene is yurN [H]

Identifier: 116872273

GI number: 116872273

Start: 886240

End: 887118

Strand: Direct

Name: yurN [H]

Synonym: lwe0853

Alternate gene names: 116872273

Gene position: 886240-887118 (Clockwise)

Preceding gene: 116872272

Following gene: 116872274

Centisome position: 31.49

GC content: 36.75

Gene sequence:

>879_bases
ATGAAGCGGCGAAATAATAAATTGGGCTGGTCATTTACCAGCCCGTATCTCATATTCACAGCGATATTTTTCTTAGTACC
GCTCGTTTGGTCCATTTGGTTATCTGTGACGGACTGGAACATGATGAGTCCAGAAATCAATTTTGTTGGTTTTGATAATT
TTATTAAAGCATTTACAAGTCCAGCAGTTCAAGCCGCTTTTTTTGTTACCTATAAGTTTTTAATTGTGTTTGTTCCGATG
GCGTTAATTATTTCCATGATTGTTGCGGTATTAGTTAACGGGCTTCCAAGGTTTAAGGGGTTATATTTAGTAGCTTTTTT
CCTACCTTATTTATCTTCTGGGGTTGTAACTTCTTTAATTGTCCAAGGTTTACTTTCATATAATAGTGCCCTTAATGTGT
TTTTACGAGGACATTTTGGTTGGGATATTGATTGGCTCGGGACACCAATGTCTGCACTCGTTATTATTTCACTTATGATT
GCTTGGAAAATGTCTGGTTATTATGCACTTATTTTGATTTCCGGACTTTCGAGCATTAATCATGAAATTTATGAAGCTGC
AGCAATGGATGGTTCTGGAAGATTTAGAACTTTTTGGAAAGTAACTGTGCCAATGATGTATCCTGCATTATTTACGGTTA
TAGTTTTAGCGGTAGGTGTTAGTTTTGGGATTTTTACCGAAGTATACCAATTAACTGGCGGTGGACCAAACTTCGCAACA
AATACTTGGCAAATGGAAATTTTCAATCAAGCGTTTGTTAACTTGAATTCTGGTTATGCTTCTGCAATTTCACTTATGGC
CGCAACTGTAACGTTTGCATCGATTGGTGTCATTAAGAAAATGCTTGAGAAATGGGGTCAAAGAAATGGTTGGACATAA

Upstream 100 bases:

>100_bases
TCATTGGGGAAGAAGCATGGAATCCGATTGTTCGCGGGGAGAAGAAACCTGCTAAAGCTTGGTCTGATATGAAGAAAGCG
GAGGATGGGGTGCTTCAAAA

Downstream 100 bases:

>100_bases
TAGTAAAGCGGGGAAAATTGTTCGCTATATACTGACAACATTACTCATGCTAGTTATGATTTATCCGTTTATTTATCTTG
TCTTAAACTCATTTGCAGCT

Product: sugar ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPM
ALIISMIVAVLVNGLPRFKGLYLVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
AWKMSGYYALILISGLSSINHEIYEAAAMDGSGRFRTFWKVTVPMMYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT

Sequences:

>Translated_292_residues
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPM
ALIISMIVAVLVNGLPRFKGLYLVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
AWKMSGYYALILISGLSSINHEIYEAAAMDGSGRFRTFWKVTVPMMYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT
>Mature_292_residues
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPM
ALIISMIVAVLVNGLPRFKGLYLVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
AWKMSGYYALILISGLSSINHEIYEAAAMDGSGRFRTFWKVTVPMMYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=264, Percent_Identity=28.7878787878788, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790465, Length=195, Percent_Identity=29.2307692307692, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787570, Length=252, Percent_Identity=24.6031746031746, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32630; Mature: 32630

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCC
PAVQAAFFVTYKFLIVFVPMALIISMIVAVLVNGLPRFKGLYLVAFFLPYLSSGVVTSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMIAWKMSGYYALILISGLSSIN
HHHHHHHHHHHHHHEEECCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HEIYEAAAMDGSGRFRTFWKVTVPMMYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCC
PAVQAAFFVTYKFLIVFVPMALIISMIVAVLVNGLPRFKGLYLVAFFLPYLSSGVVTSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMIAWKMSGYYALILISGLSSIN
HHHHHHHHHHHHHHEEECCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HEIYEAAAMDGSGRFRTFWKVTVPMMYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
HHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]