| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is yvgN [H]
Identifier: 116872237
GI number: 116872237
Start: 844514
End: 845338
Strand: Direct
Name: yvgN [H]
Synonym: lwe0817
Alternate gene names: 116872237
Gene position: 844514-845338 (Clockwise)
Preceding gene: 116872235
Following gene: 116872238
Centisome position: 30.01
GC content: 37.09
Gene sequence:
>825_bases TTGAACTTAAAAGATACAGTAAAACTTGCAAATGGTGTTGAAATGCCCCGTTTAGGATTTGGCGTATGGAAAGTGAAAGA CGGCGACGAAGCAGTAAATTCTGTTAAATGGGCAATCGAAGCTGGTTATATTAGCATTGATACAGCAGCTGCATACAAAA ATGAAGAAGGCGTTGGTCAAGCTATTAAAGAGTCCGGCGTTAAAAGAGAAGACTTGTTTGTAACAACGAAACTTTGGAAT GCAGAACAAGGTTATGAATCCACATTAGCTGCATTTGATGAAAGTTTACGTAAATTAGAACTTGATTATGTAGACTTATA TTTGATTCACTGGCCAGTAGAAGGTAAATTCAAAGACACTTGGCGCGCTTTTGAAAAATTATATAAAGATAAACGCGTTC GCGCAATTGGCGTTTGTAACTTCCACGAACATCATTTAAAAGAATTAATGGAAGATGCAGAAATCGCTCCAATGGTTAAC CAAATTGAATTACATCCACAATTAACACAAGAACCATTACGTAAATTCTGTGCGGAAAACAATATTGTAGTGGAAGCTTG GTCCCCACTTGGTAACGGTAAACTTCTTGCTAACCCTGAAATTAAAGCAATTGCTGATGCACATGGTAAATCAGTTGCAC AAGTTATTCTTCGTTGGGACTTACAAATTGGTGTCGTAACGATTCCAAAATCGGTCCACCAAGAACGTATTATCCAAAAC GCGGATATTTTCGATTTCGAATTAACAGAAGAAGAAGTAGCAAAAATCAGCGGATTAAATAAAGACGAAAGAACTGGCCC AGATCCAGATAATTTCAATTTCTAA
Upstream 100 bases:
>100_bases TTAATCATAGCATCTTGAAAATCGAAAAGCCAAATGTTTGCCTTCGAGTGCACTCTAAGGTGTATAGTAAACGTGTTATT ACTTTTAGGAGGCGGATAAA
Downstream 100 bases:
>100_bases AATAAAAAAGTTGAGATCCCTTCCAACGTTTCATATTGGAAGGGATTTTTGCTATGCTTTTATGCTACAATAAATGAAAA AAAGAGGTTAACATGGAACC
Product: aldo/keto reductase family protein
Products: NA
Alternate protein names: GR; Methylglyoxal reductase [H]
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MNLKDTVKLANGVEMPRLGFGVWKVKDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKESGVKREDLFVTTKLWN AEQGYESTLAAFDESLRKLELDYVDLYLIHWPVEGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVN QIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLLANPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQN ADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF
Sequences:
>Translated_274_residues MNLKDTVKLANGVEMPRLGFGVWKVKDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKESGVKREDLFVTTKLWN AEQGYESTLAAFDESLRKLELDYVDLYLIHWPVEGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVN QIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLLANPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQN ADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF >Mature_274_residues MNLKDTVKLANGVEMPRLGFGVWKVKDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIKESGVKREDLFVTTKLWN AEQGYESTLAAFDESLRKLELDYVDLYLIHWPVEGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVN QIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLLANPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQN ADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF
Specific function: Reduces glyoxal and methylglyoxal. Is not involved in the vitamin B6 biosynthesis [H]
COG id: COG0656
COG function: function code R; Aldo/keto reductases, related to diketogulonate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase family [H]
Homologues:
Organism=Homo sapiens, GI223468663, Length=294, Percent_Identity=39.7959183673469, Blast_Score=202, Evalue=2e-52, Organism=Homo sapiens, GI24497577, Length=295, Percent_Identity=36.9491525423729, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI5174391, Length=295, Percent_Identity=36.9491525423729, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI310109922, Length=279, Percent_Identity=40.5017921146953, Blast_Score=193, Evalue=2e-49, Organism=Homo sapiens, GI45446745, Length=299, Percent_Identity=39.1304347826087, Blast_Score=192, Evalue=2e-49, Organism=Homo sapiens, GI4503285, Length=299, Percent_Identity=39.1304347826087, Blast_Score=192, Evalue=2e-49, Organism=Homo sapiens, GI310109920, Length=299, Percent_Identity=38.7959866220736, Blast_Score=191, Evalue=5e-49, Organism=Homo sapiens, GI5453543, Length=298, Percent_Identity=38.255033557047, Blast_Score=191, Evalue=6e-49, Organism=Homo sapiens, GI93277124, Length=305, Percent_Identity=36.7213114754098, Blast_Score=184, Evalue=8e-47, Organism=Homo sapiens, GI5174695, Length=298, Percent_Identity=36.5771812080537, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI24497583, Length=296, Percent_Identity=36.8243243243243, Blast_Score=181, Evalue=5e-46, Organism=Homo sapiens, GI24497585, Length=297, Percent_Identity=36.7003367003367, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI291291012, Length=298, Percent_Identity=36.9127516778523, Blast_Score=179, Evalue=3e-45, Organism=Homo sapiens, GI4502049, Length=292, Percent_Identity=40.4109589041096, Blast_Score=177, Evalue=8e-45, Organism=Homo sapiens, GI300116271, Length=276, Percent_Identity=36.9565217391304, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI300116273, Length=277, Percent_Identity=34.2960288808664, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI207028673, Length=117, Percent_Identity=48.7179487179487, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI310109924, Length=145, Percent_Identity=37.9310344827586, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI310109926, Length=117, Percent_Identity=47.8632478632479, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI87082198, Length=271, Percent_Identity=45.7564575645756, Blast_Score=258, Evalue=3e-70, Organism=Escherichia coli, GI1786400, Length=258, Percent_Identity=36.4341085271318, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1788081, Length=272, Percent_Identity=32.3529411764706, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI1788070, Length=217, Percent_Identity=27.6497695852535, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI87081735, Length=269, Percent_Identity=24.907063197026, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI48994888, Length=252, Percent_Identity=24.2063492063492, Blast_Score=64, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17537077, Length=294, Percent_Identity=40.8163265306122, Blast_Score=205, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17537075, Length=300, Percent_Identity=39.6666666666667, Blast_Score=199, Evalue=9e-52, Organism=Caenorhabditis elegans, GI17564128, Length=299, Percent_Identity=36.1204013377926, Blast_Score=192, Evalue=1e-49, Organism=Caenorhabditis elegans, GI71998625, Length=280, Percent_Identity=39.6428571428571, Blast_Score=191, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17537079, Length=304, Percent_Identity=35.1973684210526, Blast_Score=189, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17550248, Length=293, Percent_Identity=36.8600682593857, Blast_Score=184, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17566692, Length=280, Percent_Identity=37.5, Blast_Score=180, Evalue=8e-46, Organism=Caenorhabditis elegans, GI17538386, Length=272, Percent_Identity=36.7647058823529, Blast_Score=177, Evalue=7e-45, Organism=Caenorhabditis elegans, GI17561298, Length=274, Percent_Identity=34.3065693430657, Blast_Score=170, Evalue=6e-43, Organism=Caenorhabditis elegans, GI17552492, Length=273, Percent_Identity=30.7692307692308, Blast_Score=157, Evalue=5e-39, Organism=Caenorhabditis elegans, GI17562292, Length=275, Percent_Identity=33.8181818181818, Blast_Score=157, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17561300, Length=276, Percent_Identity=34.0579710144928, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17550246, Length=81, Percent_Identity=45.679012345679, Blast_Score=71, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6320576, Length=292, Percent_Identity=43.1506849315069, Blast_Score=212, Evalue=5e-56, Organism=Saccharomyces cerevisiae, GI6324694, Length=296, Percent_Identity=39.527027027027, Blast_Score=195, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6321896, Length=312, Percent_Identity=34.6153846153846, Blast_Score=170, Evalue=2e-43, Organism=Saccharomyces cerevisiae, GI6322556, Length=257, Percent_Identity=35.408560311284, Blast_Score=164, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6319625, Length=288, Percent_Identity=35.7638888888889, Blast_Score=164, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320079, Length=249, Percent_Identity=35.7429718875502, Blast_Score=140, Evalue=2e-34, Organism=Drosophila melanogaster, GI24663317, Length=300, Percent_Identity=41.3333333333333, Blast_Score=222, Evalue=2e-58, Organism=Drosophila melanogaster, GI45553081, Length=297, Percent_Identity=38.7205387205387, Blast_Score=196, Evalue=1e-50, Organism=Drosophila melanogaster, GI24644950, Length=296, Percent_Identity=39.1891891891892, Blast_Score=194, Evalue=4e-50, Organism=Drosophila melanogaster, GI20129731, Length=294, Percent_Identity=37.7551020408163, Blast_Score=191, Evalue=4e-49, Organism=Drosophila melanogaster, GI24657054, Length=292, Percent_Identity=37.6712328767123, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI24662789, Length=293, Percent_Identity=36.8600682593857, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI221378297, Length=316, Percent_Identity=36.7088607594937, Blast_Score=187, Evalue=8e-48, Organism=Drosophila melanogaster, GI21356425, Length=294, Percent_Identity=36.3945578231293, Blast_Score=183, Evalue=1e-46, Organism=Drosophila melanogaster, GI24662781, Length=277, Percent_Identity=40.7942238267148, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI281366140, Length=256, Percent_Identity=37.890625, Blast_Score=168, Evalue=4e-42, Organism=Drosophila melanogaster, GI24662785, Length=295, Percent_Identity=38.9830508474576, Blast_Score=162, Evalue=2e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR018170 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: =1.1.1.283 [H]
Molecular weight: Translated: 31048; Mature: 31048
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00062 ALDOKETO_REDUCTASE_2 ; PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLKDTVKLANGVEMPRLGFGVWKVKDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQ CCCHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHEEEECEEEEEHHHHHCCCCHHHH AIKESGVKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPVEGKFKDT HHHHCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHH WRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVNQIELHPQLTQEPLRKFCAEN HHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCHHCCHHHHEECCCCHHHHHHHHHHCCC NIVVEAWSPLGNGKLLANPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQN CEEEEECCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCC ADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF CCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNLKDTVKLANGVEMPRLGFGVWKVKDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQ CCCHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHEEEECEEEEEHHHHHCCCCHHHH AIKESGVKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPVEGKFKDT HHHHCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHH WRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVNQIELHPQLTQEPLRKFCAEN HHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCCHHCCHHHHEECCCCHHHHHHHHHHCCC NIVVEAWSPLGNGKLLANPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQN CEEEEECCCCCCCEEEECCCHHHHHHHCCHHHHHHHHHHCCEEEEEECCHHHHHHHHHCC ADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF CCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]