| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872238
Identifier: 116872238
GI number: 116872238
Start: 845431
End: 846399
Strand: Direct
Name: 116872238
Synonym: lwe0818
Alternate gene names: NA
Gene position: 845431-846399 (Clockwise)
Preceding gene: 116872237
Following gene: 116872239
Centisome position: 30.04
GC content: 36.43
Gene sequence:
>969_bases ATGGAACCTAAAAAAATTATTGAAAACCGCTTTTTTAATCAAAAATTAGCAGAATCAGCATGGGTAGCTTCCCCCGAAGA AGTGGTATTTCATTTTGGCGCAATGCAGTCTCAAAATTACTCGCAATCGTTGTGGGCTGTTGGGAGTAGGTTAATTACCC CAAGCGAGCTAGCTGTTAAAAAAGCAATTGATAATGGTGAAATTATCCGAACGTGGCTTTTACGAGGAACGATTCACCTT TTTTCTGCACGTGATTATCACTGGATGATGGATTTAATTGCACCTACCATAGATAAAATTTGTAGACCACACCGAAAAAA ATTAGGTTTAACAGAAGAAATTCTTAGTAAAGCTTCTGAAGTTGTAGAAACCTTCGTTGCAAAAGAAGTAGTGACTAGAA AAGAGTTAGCAAACCATTTAGCTGAAAACAATTTACCAAATGCAGGTATCCCGTTTGCGCAATTATTGGTTTATTTAAGC TCACGGAAAATTATTTGTTCAGGACCAAATGAAACTTTTAGAAATATAGAGCTTATACCTAAACAAACGCATATTTTTAC GAGAGAAGAAGCTGTACAAGAATTAGCTAAGCGCTATCTTCAAAGTCATGCACCAGCCACTTTAAAAGACTTTTGCTTTT GGTCTGGTTTAACTGTGACTGATGCAAAAATGGCTTTGGCTAACTTTACTAAAGAAGATGAATTCTATTTAAATGAATTG ACTAAAAATGTCATTTCCACTCGTCAAATCCCTCTTGCGGGTTTTGACGAGTGGATTATCGGATACAAGGATCGCTCTAT TGTTTTGTCTGAAGCGTGGCAGGATGAAATCATTACTAAAAATGGTATTTTTCGACCAGCGATTATTTCAGATGGTCAAG TTGTGGGTAAATGGGAAAAACCTAAAAAACAAATAGAACTACAAGGAGAATACTGGGATCGTTACATCCAGTTTCGGAAT ATGCTATAG
Upstream 100 bases:
>100_bases ATTTCTAAAATAAAAAAGTTGAGATCCCTTCCAACGTTTCATATTGGAAGGGATTTTTGCTATGCTTTTATGCTACAATA AATGAAAAAAAGAGGTTAAC
Downstream 100 bases:
>100_bases TCAAGTATGCAGAGAAATTTTAATTTGAGGTGATTATGCAATGCAATCTTTTGATAAATTTTATAAAAAAACACTAGAAG AACGTCAAGTAATTTTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MEPKKIIENRFFNQKLAESAWVASPEEVVFHFGAMQSQNYSQSLWAVGSRLITPSELAVKKAIDNGEIIRTWLLRGTIHL FSARDYHWMMDLIAPTIDKICRPHRKKLGLTEEILSKASEVVETFVAKEVVTRKELANHLAENNLPNAGIPFAQLLVYLS SRKIICSGPNETFRNIELIPKQTHIFTREEAVQELAKRYLQSHAPATLKDFCFWSGLTVTDAKMALANFTKEDEFYLNEL TKNVISTRQIPLAGFDEWIIGYKDRSIVLSEAWQDEIITKNGIFRPAIISDGQVVGKWEKPKKQIELQGEYWDRYIQFRN ML
Sequences:
>Translated_322_residues MEPKKIIENRFFNQKLAESAWVASPEEVVFHFGAMQSQNYSQSLWAVGSRLITPSELAVKKAIDNGEIIRTWLLRGTIHL FSARDYHWMMDLIAPTIDKICRPHRKKLGLTEEILSKASEVVETFVAKEVVTRKELANHLAENNLPNAGIPFAQLLVYLS SRKIICSGPNETFRNIELIPKQTHIFTREEAVQELAKRYLQSHAPATLKDFCFWSGLTVTDAKMALANFTKEDEFYLNEL TKNVISTRQIPLAGFDEWIIGYKDRSIVLSEAWQDEIITKNGIFRPAIISDGQVVGKWEKPKKQIELQGEYWDRYIQFRN ML >Mature_322_residues MEPKKIIENRFFNQKLAESAWVASPEEVVFHFGAMQSQNYSQSLWAVGSRLITPSELAVKKAIDNGEIIRTWLLRGTIHL FSARDYHWMMDLIAPTIDKICRPHRKKLGLTEEILSKASEVVETFVAKEVVTRKELANHLAENNLPNAGIPFAQLLVYLS SRKIICSGPNETFRNIELIPKQTHIFTREEAVQELAKRYLQSHAPATLKDFCFWSGLTVTDAKMALANFTKEDEFYLNEL TKNVISTRQIPLAGFDEWIIGYKDRSIVLSEAWQDEIITKNGIFRPAIISDGQVVGKWEKPKKQIELQGEYWDRYIQFRN ML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37104; Mature: 37104
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPKKIIENRFFNQKLAESAWVASPEEVVFHFGAMQSQNYSQSLWAVGSRLITPSELAVK CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH KAIDNGEIIRTWLLRGTIHLFSARDYHWMMDLIAPTIDKICRPHRKKLGLTEEILSKASE HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHH VVETFVAKEVVTRKELANHLAENNLPNAGIPFAQLLVYLSSRKIICSGPNETFRNIELIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCCCCHHCCEEECC KQTHIFTREEAVQELAKRYLQSHAPATLKDFCFWSGLTVTDAKMALANFTKEDEFYLNEL CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHH TKNVISTRQIPLAGFDEWIIGYKDRSIVLSEAWQDEIITKNGIFRPAIISDGQVVGKWEK HHHHHHHCCCCCCCCHHHHEECCCCEEEHHHHHHHHHHCCCCCCCCEEECCCCEECCCCC PKKQIELQGEYWDRYIQFRNML CCHHEEECHHHHHHHHHHHHCC >Mature Secondary Structure MEPKKIIENRFFNQKLAESAWVASPEEVVFHFGAMQSQNYSQSLWAVGSRLITPSELAVK CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH KAIDNGEIIRTWLLRGTIHLFSARDYHWMMDLIAPTIDKICRPHRKKLGLTEEILSKASE HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHH VVETFVAKEVVTRKELANHLAENNLPNAGIPFAQLLVYLSSRKIICSGPNETFRNIELIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEECCCCCHHCCEEECC KQTHIFTREEAVQELAKRYLQSHAPATLKDFCFWSGLTVTDAKMALANFTKEDEFYLNEL CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEHHHHHHHHHCCCCHHHHHHHH TKNVISTRQIPLAGFDEWIIGYKDRSIVLSEAWQDEIITKNGIFRPAIISDGQVVGKWEK HHHHHHHCCCCCCCCHHHHEECCCCEEEHHHHHHHHHHCCCCCCCCEEECCCCEECCCCC PKKQIELQGEYWDRYIQFRNML CCHHEEECHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA