Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is yjaB [H]
Identifier: 116690002
GI number: 116690002
Start: 2198651
End: 2199100
Strand: Direct
Name: yjaB [H]
Synonym: Bcen2424_1981
Alternate gene names: 116690002
Gene position: 2198651-2199100 (Clockwise)
Preceding gene: 116690001
Following gene: 116690004
Centisome position: 63.11
GC content: 61.78
Gene sequence:
>450_bases ATGATCAGAATCCGACAATCCACCGAGGCCGACGGCACATACGTTCTGGACATCTGGCGCAACGCCGTCGATGCCACGCA TCACTTCCTGAGCGACAACGACCGTCGCGCGATCGAATCCGAAGTCGTCGCATTTCTGCCGGGCGCGCCGCTCGATCTAG CCGTCGACGAAACCGATCGCCCGATCGGTTTCATGCTGCTCGACGGCGGCCACATGGAAGCGCTGTTCGTCGATCCCGCC CACCATGGTGCGGGGGTCGGGCGGCGGCTGGTCGAAGAAGCGCTCAAGCGCCATTCCAACTTGTCGACCGACGTCAACGA ACAGAACGAGGCGGCTGCGGGATTTTATGAACGGCTCGGATTCGAGCGCTGCGGGAGATCGGCACTGGATGGACAAGGTC GGCCTTATCCGCTGATTCACCTTCGTTATCGCGGTGGCGATCGGGACTGA
Upstream 100 bases:
>100_bases TCCGGCTGACACACCGCTGTCGCTTGCGCATCACCGCGACGCGTTCGCTCCGTCACGACGCCCGCTACCCGCCGAGCGCC AGATCACCACCCGTCAAACC
Downstream 100 bases:
>100_bases GCCGGCGTCCCGACGAGAACGGGACGCTGTACCGGCCCGGTCCGGATGCGCTGAAACGGCACCGCACTTGCGGCATCGCG ATCACCCCGAGGCGCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MIRIRQSTEADGTYVLDIWRNAVDATHHFLSDNDRRAIESEVVAFLPGAPLDLAVDETDRPIGFMLLDGGHMEALFVDPA HHGAGVGRRLVEEALKRHSNLSTDVNEQNEAAAGFYERLGFERCGRSALDGQGRPYPLIHLRYRGGDRD
Sequences:
>Translated_149_residues MIRIRQSTEADGTYVLDIWRNAVDATHHFLSDNDRRAIESEVVAFLPGAPLDLAVDETDRPIGFMLLDGGHMEALFVDPA HHGAGVGRRLVEEALKRHSNLSTDVNEQNEAAAGFYERLGFERCGRSALDGQGRPYPLIHLRYRGGDRD >Mature_149_residues MIRIRQSTEADGTYVLDIWRNAVDATHHFLSDNDRRAIESEVVAFLPGAPLDLAVDETDRPIGFMLLDGGHMEALFVDPA HHGAGVGRRLVEEALKRHSNLSTDVNEQNEAAAGFYERLGFERCGRSALDGQGRPYPLIHLRYRGGDRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1790442, Length=146, Percent_Identity=53.4246575342466, Blast_Score=157, Evalue=3e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 16612; Mature: 16612
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRIRQSTEADGTYVLDIWRNAVDATHHFLSDNDRRAIESEVVAFLPGAPLDLAVDETDR CEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCC PIGFMLLDGGHMEALFVDPAHHGAGVGRRLVEEALKRHSNLSTDVNEQNEAAAGFYERLG CEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC FERCGRSALDGQGRPYPLIHLRYRGGDRD HHHCCCCCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MIRIRQSTEADGTYVLDIWRNAVDATHHFLSDNDRRAIESEVVAFLPGAPLDLAVDETDR CEEECCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCC PIGFMLLDGGHMEALFVDPAHHGAGVGRRLVEEALKRHSNLSTDVNEQNEAAAGFYERLG CEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC FERCGRSALDGQGRPYPLIHLRYRGGDRD HHHCCCCCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2412207; 8265357; 9278503; 1709493 [H]