The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689998

Identifier: 116689998

GI number: 116689998

Start: 2195742

End: 2196737

Strand: Direct

Name: 116689998

Synonym: Bcen2424_1977

Alternate gene names: NA

Gene position: 2195742-2196737 (Clockwise)

Preceding gene: 116689997

Following gene: 116689999

Centisome position: 63.03

GC content: 74.4

Gene sequence:

>996_bases
ATGACCGCTTCTTCCTCCGCTTTCCCGCTGCCCGGCGTGCCGGCCGCCGATCATGCCGCGCTCGTCGCGCGCCTCGCCGC
AGCCGACGCATCGGTGCGCCGCATCGCGCTGCTCGAACTCGCCGATCTCGAAGCGCCCGAACTCGTGCCGTCGTTCATCG
CGGCGCTGCGCGACGACCCGTCGGCCGACGTGCGCAGCGAGGCCGCGCGCGTGCTCGACGCATGGGAGCAGCCCGAGGTC
GTCGACGCGCTGTGCCACGCGCTGCTCGATCCGGACAACGGCGTGCGCGCCACCGCCGCGCAAAGCCTGTCCGAACTGAA
GGACGCGGCATCGGGCGCCGTGCTGTGCCGCTGGGCCGACCGGTCCGAGCCGTTCGTGCGCGGCGCCGTGCTGCGCGGCT
TGCGCGAGTTGCGCGACCCCGACGCGTTCGCGCCCGCGCTGCGCGCGCTCGACGCGAGCGCCGCTGCCGTCCGAGCCGAG
GCGGTCGTCGTGCTCGGCTGGCTCAAGGACGGCCGCGCGCTGCCGCCGCTCGCCCGCGTCGCGACCGCGGACGCCGACGC
GGACGTGCGGCGCGCCGCGGTCGGCGCAATCGGGTTTGCGGCGGCGGGCGATACCGCCGTCGTCACCGCGTTGCTCGCGG
CGCTGCGTGACGCCGAATGGCAGGTGCGCGAAGAAGCGGCTGCCACGCTCGGCAAGCTGCGCATCGCCGCTGCGCGCGAC
CCGCTCGTCGCCGCGCTCGACGACGACTACTGGCAAGTGCGCGTGCGTGCCGTCCGCGCGCTGGGCCAATTGCGCGATGC
GGCCGCGGCGTCGGCCGTCGTCGCGCTGCTCTCGCATACGATCAGCAACCTGCGCAAGGAAGCCGCGCTCGCGCTCGGCG
AATTGCTCGACCGGGCGACGCTGCGGGCGCTACACGACGCACTCGACGATCGCGACCCCGAAGTCCGCAAGGCCGTGCGG
ATCGCGATCGGACAGATCGACGAGGCGTCGCGATGA

Upstream 100 bases:

>100_bases
CGAGCCCGCGTTCGTCGACATCAAGCGCCGCTGCCTCGCGCTGTTGCGCGATGCCGCCTGAGCGCACGTGCCCGCCCATT
CACCGCACCGACTCTTTCCC

Downstream 100 bases:

>100_bases
TCGCGCCGACCGAAATCGCACTCGATCACCCGGCACGCGCACTGACGCTGCGCTGGCCCGACGGCGCGACGCAACGTATC
GGCTATGCGCAGTTGCGCAG

Product: heat domain-containing protein

Products: NA

Alternate protein names: HEAT Repeat-Containing Protein; Phycobiliprotein; HEAT Repeat; HEAT Repeat Protein; PBS Lyase HEAT Domain Protein Repeat-Containing Protein; HEAT Domain Containing Protein

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTASSSAFPLPGVPAADHAALVARLAAADASVRRIALLELADLEAPELVPSFIAALRDDPSADVRSEAARVLDAWEQPEV
VDALCHALLDPDNGVRATAAQSLSELKDAASGAVLCRWADRSEPFVRGAVLRGLRELRDPDAFAPALRALDASAAAVRAE
AVVVLGWLKDGRALPPLARVATADADADVRRAAVGAIGFAAAGDTAVVTALLAALRDAEWQVREEAAATLGKLRIAAARD
PLVAALDDDYWQVRVRAVRALGQLRDAAAASAVVALLSHTISNLRKEAALALGELLDRATLRALHDALDDRDPEVRKAVR
IAIGQIDEASR

Sequences:

>Translated_331_residues
MTASSSAFPLPGVPAADHAALVARLAAADASVRRIALLELADLEAPELVPSFIAALRDDPSADVRSEAARVLDAWEQPEV
VDALCHALLDPDNGVRATAAQSLSELKDAASGAVLCRWADRSEPFVRGAVLRGLRELRDPDAFAPALRALDASAAAVRAE
AVVVLGWLKDGRALPPLARVATADADADVRRAAVGAIGFAAAGDTAVVTALLAALRDAEWQVREEAAATLGKLRIAAARD
PLVAALDDDYWQVRVRAVRALGQLRDAAAASAVVALLSHTISNLRKEAALALGELLDRATLRALHDALDDRDPEVRKAVR
IAIGQIDEASR
>Mature_330_residues
TASSSAFPLPGVPAADHAALVARLAAADASVRRIALLELADLEAPELVPSFIAALRDDPSADVRSEAARVLDAWEQPEVV
DALCHALLDPDNGVRATAAQSLSELKDAASGAVLCRWADRSEPFVRGAVLRGLRELRDPDAFAPALRALDASAAAVRAEA
VVVLGWLKDGRALPPLARVATADADADVRRAAVGAIGFAAAGDTAVVTALLAALRDAEWQVREEAAATLGKLRIAAARDP
LVAALDDDYWQVRVRAVRALGQLRDAAAASAVVALLSHTISNLRKEAALALGELLDRATLRALHDALDDRDPEVRKAVRI
AIGQIDEASR

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34705; Mature: 34573

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASSSAFPLPGVPAADHAALVARLAAADASVRRIALLELADLEAPELVPSFIAALRDDP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
SADVRSEAARVLDAWEQPEVVDALCHALLDPDNGVRATAAQSLSELKDAASGAVLCRWAD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
RSEPFVRGAVLRGLRELRDPDAFAPALRALDASAAAVRAEAVVVLGWLKDGRALPPLARV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHH
ATADADADVRRAAVGAIGFAAAGDTAVVTALLAALRDAEWQVREEAAATLGKLRIAAARD
HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PLVAALDDDYWQVRVRAVRALGQLRDAAAASAVVALLSHTISNLRKEAALALGELLDRAT
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRALHDALDDRDPEVRKAVRIAIGQIDEASR
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TASSSAFPLPGVPAADHAALVARLAAADASVRRIALLELADLEAPELVPSFIAALRDDP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
SADVRSEAARVLDAWEQPEVVDALCHALLDPDNGVRATAAQSLSELKDAASGAVLCRWAD
CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
RSEPFVRGAVLRGLRELRDPDAFAPALRALDASAAAVRAEAVVVLGWLKDGRALPPLARV
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHHHH
ATADADADVRRAAVGAIGFAAAGDTAVVTALLAALRDAEWQVREEAAATLGKLRIAAARD
HHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
PLVAALDDDYWQVRVRAVRALGQLRDAAAASAVVALLSHTISNLRKEAALALGELLDRAT
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRALHDALDDRDPEVRKAVRIAIGQIDEASR
HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA